Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tan06g2777 | ATGGCACCATCTGTTCTTTCGAACTCCGATCGTGCGCGGGAGTCTTCAAGGAAGCAAAAGAAGAAGAAAAGCCACGGCAATAGAGACCATCATCAAAACCAGAACCATATTAAATGGAAGTCTGAAGCTCAGCAGGAAATTTACTCGTCCAAGCTGGTACGAGCATTGAATCAAGTGAGGCTCAGTCCTTCGAATGAGGCGCCGCGCCGCGGCAGAGCCGTACGCGAGGCCGCCGATAGAGTCCTCGCCGTCGCCGCCAAGGGGAGAACAAGGTGGAGCCGAGCCATCTTAACGAACCGGCTGAAGCTCAAGTTCAGGAAGCCGAAGAGACAAAGAGCATCCACCGCCGGAAACAATCGCCCAAAGAAACCTAGAGTCAGCGTATTGCGGTTGAAAGGGAAATCGTTACCGGCGGTGCAAAGGAAAGTTAGGGTTCTTGGACGGCTAGTTCCCGGTTGCCGGAAAGAACCGTTGCCGGTTATCCTGGAAGAGGCGACCGATTACATAGCTGCACTTGAAATGCAAGTTCGAGCTATGAGTGCCCTCGCCGAGTTGCTCTCGGCCTCAACTTCTGTTGCAGGCTCTAGTTCTGCTCCTCCAAGCTGA | 606 | 53.63 | MAPSVLSNSDRARESSRKQKKKKSHGNRDHHQNQNHIKWKSEAQQEIYSSKLVRALNQVRLSPSNEAPRRGRAVREAADRVLAVAAKGRTRWSRAILTNRLKLKFRKPKRQRASTAGNNRPKKPRVSVLRLKGKSLPAVQRKVRVLGRLVPGCRKEPLPVILEEATDYIAALEMQVRAMSALAELLSASTSVAGSSSAPPS | 201 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 6 | 79941300 | 79944305 | + | Tan0011281.1 | Tan06g2777 | 757481 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tan06g2777 | 201 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 142 | 189 | IPR036638 | GO:0046983(InterPro) | |
| Tan06g2777 | 201 | PANTHER | TRANSCRIPTION FACTOR IBH1-LIKE 1 | 36 | 186 | IPR044660 | GO:0006355(InterPro) | |
| Tan06g2777 | 201 | CDD | bHLH_AtIBH1_like | 128 | 183 | IPR044549 | GO:0006355(InterPro) | |
| Tan06g2777 | 201 | MobiDBLite | consensus disorder prediction | 1 | 40 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Tan06g2777 | Tan-Chr6:79941300 | Tan10g1085 | Tan-Chr10:10157437 | 4.30E-53 | dispersed | |
| Tan06g2777 | Tan-Chr6:79941300 | Tan09g0071 | Tan-Chr9:3157852 | 6.10E-39 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tan06g2777 | - | - | - | 0.0 |