Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan06g2785 ATGGCTCGTAAGGGTAATCAACAGAAAACAGGGTCAGAGCGCCATGCATCAAACAGTAAAAAGAGAGGTTCAGACTTGCAGTCCAAGGGACAAGGAAGAGCACGAGAGATAAAGGTATTTCCCGGAGAGGATTTACCAAATGACAACCAACATAGTAAATCCTTTGAGGAAGGCATGGTGAGTGGTGACTCTGGAGAGGGTATAATGAATGCCAAAAAATCTGCGAAGTCCTTGAGAAAAGAAAAACAAGGAATGGAAGGACTCCATACTCCAGACGAGCCAACATTTCCCCCCAAAGAATTTGGGAGCTGCAATGGAAACAATGAGGGTTCTAGTGTAGGAGAACAATACAAGGGGTCTACTGGTGATAAGGAGCGGGTTCATTTAGATGGTAATTTCAGCTGCTTTTTAAATCGGGAACACATCAGAAATGTGATGGATAATCTAAAGTTTTCAGATAATATTTTGGTGAAAAGCTTTGTGGAATCTATGTCATCAATATTTGAAGCAGCCCATGTGTTGCTGGAGCAGCAGAGACCTCTGTTTAATTCTATGAAGAACAATTTACTAAACTCAAGTGACTATGTTGGGAAAAAGATTAAGAAGGCATATCCCATTGTTCTGAAGTGGATGATCCATTGTGGGAACATAATGCTTCTCATATCGATTGTATGGTTGGACTGTGCCCTCAGGGGCATTGATTCCTTTATTCGTATGGGGACAACATCCTTCTTCTCAGTTTTATGGTTCTCCATTCTTTCAACAATTTCAATGGTTGGAATTCTTAAATTCCTCGTGGTCTTGGTAATAGCTGCTTCCCTTGGAATTTTTGTTGGGTTTGCTTTTCCAATTTTGGTCATCGCCATCTCTGGAGCAGCTTTCCTTTGGTTTTATGGAAACTTTTGGACAACAATGCTGATCATATCTCTTGGAGGATTGGCATTTATGTTGAGCCATGAACGAGTTGCACTTTTTATCACCACTTTGTATTCAGTATATTGTGCATGGGTATGCACTGGATGGCTTGGTTTGCTTTTGGGCCTGAATTTGTCATTTATCTCAAGCGATGCTCTGATATATGTCCTAAAGAACAACATGAATGAGCATAGGAGATCAAACAGATATCCTGACCAAACAGCTGGGATGCAAGATCAGCCTGGCTTCTTTCATGACGATCCTATGCAAGCATCATCTTCTGAATTTAGTGCAGGTTTTGCTGCTGATCGCAGTCAAGGCATACCTTCAACCAGTGGAGCTGATTCTGAGATATCTTCTGAAGATGAAGTCTTCCGTTTGCTGAATTGTACAGATCACTATGCAGTTTTAGGACTGTCTCGGTATGAGAATATAGATCCTTCCCTGCTCAAGAAGGAGTATAGGAAGAAGGCAATGTTGGTCCATCCTGATAAAAATATGGGCAATGAAAAGGCTGCAGAAGCATTTAAGAAACTTCAAAATGCATACGAGGTTTTACTTGATTCATTAAAGCGAAAAACCTATGATGATGAGCTGAGAAGGGAAGAGCTGCTAAACATTTTCCGCAGGTTTCAGAGTGCTTCACAGAAGAGTGGAGGGAGTGGTCCATTTTCATTTCCACGTTCAGCAGCGGATAGAGAGGATCCTTCTGGTGAATCGAGAAGAATAGCCTGCAAAAAGTGCAACAATTTTCATTTATGGATTCACACTAGGAAATTAAAATCTCAAGCAAGATGGTGCCAGGAATGCAAAGATTTTCATCAAGCAAAGGATGGGGACGGGTGGGTGGAGCAATCTTCCCAGCCTTTTCTTTTTGGATTACTGCAGAAGGTAGATGCTCCCTCTGCATACGTATGTGCCGAGAGCAGAATATATGATGCTACCGAATGGTATATTTGTCAGGGAATGAGATGTCCAGCCAACACCCACAGGCCAAGTTTTCATGTAAACACCAGTGTAACCTCTAAGCAAAACAGCAGTAAAGGATCAAGTTCTAGCCAAAGAGGAGGCCAAATGCCTTCATCAAATATAGAAGAGAACATGATGAACATGACAGAAGACGAGTTCTTTGAGTGGTTTCAGAACGCCGTGCTGACAGGTGCGTTCGACAATGTTGGTGGCAGCGCGACGGAGAGCCCGTCGGCTAAAGCAGGAGGAAGTTTCAACAAGAGTAGTAGCAACAGCGGCAGTGGGAACAAGAGAAAGAAAAAGGGAAAGAAGCAATGGTGA 2205 42.45 MARKGNQQKTGSERHASNSKKRGSDLQSKGQGRAREIKVFPGEDLPNDNQHSKSFEEGMVSGDSGEGIMNAKKSAKSLRKEKQGMEGLHTPDEPTFPPKEFGSCNGNNEGSSVGEQYKGSTGDKERVHLDGNFSCFLNREHIRNVMDNLKFSDNILVKSFVESMSSIFEAAHVLLEQQRPLFNSMKNNLLNSSDYVGKKIKKAYPIVLKWMIHCGNIMLLISIVWLDCALRGIDSFIRMGTTSFFSVLWFSILSTISMVGILKFLVVLVIAASLGIFVGFAFPILVIAISGAAFLWFYGNFWTTMLIISLGGLAFMLSHERVALFITTLYSVYCAWVCTGWLGLLLGLNLSFISSDALIYVLKNNMNEHRRSNRYPDQTAGMQDQPGFFHDDPMQASSSEFSAGFAADRSQGIPSTSGADSEISSEDEVFRLLNCTDHYAVLGLSRYENIDPSLLKKEYRKKAMLVHPDKNMGNEKAAEAFKKLQNAYEVLLDSLKRKTYDDELRREELLNIFRRFQSASQKSGGSGPFSFPRSAADREDPSGESRRIACKKCNNFHLWIHTRKLKSQARWCQECKDFHQAKDGDGWVEQSSQPFLFGLLQKVDAPSAYVCAESRIYDATEWYICQGMRCPANTHRPSFHVNTSVTSKQNSSKGSSSSQRGGQMPSSNIEENMMNMTEDEFFEWFQNAVLTGAFDNVGGSATESPSAKAGGSFNKSSSNSGSGNKRKKKGKKQW 734
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 80032185 80047388 - Tan0010844.1 Tan06g2785 757489

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Tan06g2785 734 MobiDBLite consensus disorder prediction 642 668 - -
Tan06g2785 734 MobiDBLite consensus disorder prediction 1 68 - -
Tan06g2785 734 MobiDBLite consensus disorder prediction 519 543 - -
Tan06g2785 734 PANTHER OS03G0832900 PROTEIN 1 734 - -
Tan06g2785 734 MobiDBLite consensus disorder prediction 8 42 - -
Tan06g2785 734 ProSiteProfiles dnaJ domain profile. 437 504 IPR001623 -
Tan06g2785 734 Pfam DnaJ domain 437 501 IPR001623 -
Tan06g2785 734 Gene3D DnaJ domain 426 519 IPR036869 -
Tan06g2785 734 ProSitePatterns Nt-dnaJ domain signature. 481 500 IPR018253 -
Tan06g2785 734 SMART dnaj_3 436 496 IPR001623 -
Tan06g2785 734 MobiDBLite consensus disorder prediction 696 734 - -
Tan06g2785 734 PRINTS DnaJ domain signature 476 496 IPR001623 -
Tan06g2785 734 PRINTS DnaJ domain signature 459 474 IPR001623 -
Tan06g2785 734 CDD DnaJ 437 493 IPR001623 -
Tan06g2785 734 Pfam Cleavage inducing molecular chaperone 544 642 IPR032843 -
Tan06g2785 734 SUPERFAMILY Chaperone J-domain 401 500 IPR036869 -
Tan06g2785 734 MobiDBLite consensus disorder prediction 697 721 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan06g2785 K09534 - - vvi:100246610 848.195
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g0961 Tan-Chr1:9362557 Tan06g2785 Tan-Chr6:80032185 6.30E-86 dispersed
Tan06g2785 Tan-Chr6:80032185 Tan01g0791 Tan-Chr1:7541471 8.50E-06 dispersed
Tan06g2785 Tan-Chr6:80032185 Tan01g3850 Tan-Chr1:103252616 3.30E-10 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi5g34 Blo01g00041 . . Bda08g00322 . . . Bma05g01008 Cmo08g01259 Cmo17g00374 . . . . . . . . . . . . . . Cla06g00411 Cam06g0434 Cec06g0440 Cco06g0439 Clacu06g0420 Cmu06g0420 Cre06g1199 . . . . . Csa06g01853 Chy11g01588 . . . . . Bpe05g00806 . . . Sed04g3077 . . Cma08g01294 Cma17g00385 Car08g01159 Car17g00355 Cpe12g00336 Cpe17g00081 Bhi12g01953 Tan06g2785 Cmetu11g0566 . . . Lcy12g0870 . . . . . . . . . . Cme11g02097
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0008621 1 1 1 1 1 1 2 1 1 1 1 1 2 1 1 2 1 2 2 1 2 1 1 1 1 0 1 1 1 1 35