Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan06g2803 ATGGTAGCTGAAGCTGAGATCATATGCCCCAAAACCGTTCGTGTGATGAACCTCAACTATCATCTTCGCGTAACCGAAGATCCCGATCCTCAGATCGATTTACCGCATCCTTCTTCTTCACCTATCTTTCCCGAGGCAGTTAGTTGTTCAGATATCGTCGAAGATGCCCATATAGAGTCAACTGCCATAGATTTTGTTCCAAACATTCAATCTGGTAGCTATGCAGACATTGGAGCTCGGGATTCTATGGATGATGAACATGTCTGCATTGATGATCTGTCTACCCACCTCAGATCTATGTTCAAATGTCCTATGCCTAGTGGTTTTTATGCTGTTTTCGATGGTCATGGAGGGCCTCATGCAGCTGCCTTTGTCAAGAGGAATGCCATGAGATTATTCTTTGAAGATGCTGATTGGTTAAAAATGCTGGATATTAATTCTATTTCCATGAAAGATTTGGAGAATTCTCATCGCAAAGCGTTTCTACTGGCAGATCTTGCCTTGGCTGATGAGCAAAGTGTTGGCAGCTCATGTGGGACAACTGCGTTGACGGCATTGGTTCTTGGTAGGCATTTGCTTGTTGCAAACGCTGGTGACTGCCGAGCAGTCCTATGTAGGAAAGGTGTAGCAGTTCCAATGTCTCAAGATCACAGGCCTTCTAATTTACTCGAGCTCAAGCGAGTGGAAGGGATGGGTGGGTTCGTGGACGATGGGTATGTTAATGGCTATATTTCAGTAACCAGAACCTTGGGGGATTGGGACCTGAAACTTGCAAATGGCTCCTCATCACCTCTGATTTCTGATCCACAAGTGGAGCATGTTATTTTAACAAAGGATGACGAGTTCTTGATCCTTGGCTGTGATGGGATTTGGGATGTTATGTCGAGCCAGTATGCTGTCAGTCTTGTTCGACGTGGGTTGAGGAAGCACAACGACCCTCATCAAAGTTCACGAGAATTAGTCATGGAAGCTTTGCGCCTCAACACATCAGATAATCTTACTGCAGTTGTAATCTGCTTTTCTTCTCCCAGCTGCGTTCCTCAGCAGCGAATATGGAAGTCGTGTAGTCTGACAGAAGAGGCCAGAAGTAGATTGAGAAATTTGTTAGAAGAAAACTGA 1119 44.95 MVAEAEIICPKTVRVMNLNYHLRVTEDPDPQIDLPHPSSSPIFPEAVSCSDIVEDAHIESTAIDFVPNIQSGSYADIGARDSMDDEHVCIDDLSTHLRSMFKCPMPSGFYAVFDGHGGPHAAAFVKRNAMRLFFEDADWLKMLDINSISMKDLENSHRKAFLLADLALADEQSVGSSCGTTALTALVLGRHLLVANAGDCRAVLCRKGVAVPMSQDHRPSNLLELKRVEGMGGFVDDGYVNGYISVTRTLGDWDLKLANGSSSPLISDPQVEHVILTKDDEFLILGCDGIWDVMSSQYAVSLVRRGLRKHNDPHQSSRELVMEALRLNTSDNLTAVVICFSSPSCVPQQRIWKSCSLTEEARSRLRNLLEEN 372
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 80128457 80135262 - Tan0017236.1 Tan06g2803 757507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan06g2803 372 SMART PP2C_4 60 338 IPR001932 -
Tan06g2803 372 SUPERFAMILY PP2C-like 64 341 IPR036457 -
Tan06g2803 372 FunFam Probable protein phosphatase 2C 22 53 343 - -
Tan06g2803 372 SMART PP2C_SIG_2 85 340 IPR001932 -
Tan06g2803 372 CDD PP2Cc 71 340 IPR001932 -
Tan06g2803 372 Gene3D - 54 344 IPR036457 -
Tan06g2803 372 Pfam Protein phosphatase 2C 78 332 IPR001932 -
Tan06g2803 372 ProSitePatterns PPM-type phosphatase domain signature. 109 117 IPR000222 GO:0043169(InterPro)
Tan06g2803 372 ProSiteProfiles PPM-type phosphatase domain profile. 70 340 IPR001932 -
Tan06g2803 372 PANTHER PROTEIN PHOSPHATASE 2C 57 340 IPR015655 GO:0004722(InterPro)|GO:0006470(PANTHER)|GO:0006470(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan06g0689 Tan-Chr6:5245633 Tan06g2803 Tan-Chr6:80128457 3.50E-107 dispersed
Tan06g2803 Tan-Chr6:80128457 Tan08g0349 Tan-Chr8:3108855 1.70E-66 dispersed
Tan06g2803 Tan-Chr6:80128457 Tan08g1276 Tan-Chr8:42487673 5.80E-27 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan06g2803 K14803 - csv:101207477 642.884