Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan06g2813 ATGGCGCCTGATCTTAACACAACACTTTCCAAGAAGACGTTTGTTTTTGGTATGAAGGTATGGGTATTTACTGGAATCCTGGTGGGGGTGTTTATTGTAGTAATCCTTGTGGTGCTGTCAATATGTGTTAGTTCACGAAGAAAGTCTAGAAGGGTTAATGGCATGCTTCCTATTAACCGTACTCCCGCTGCATCAAAGGAAATCAAGGATATTGGAGTGGATCATGTTTCAGCAATCCAGCACGATCGATTCGACACGGAGTCGGAAAAAGTTCTTCTATATTCAAACAAGGCGTATAATTACAGCATATCAAGCTCAGTTGATCACACAGAGATATATGCGATTGGTTCTGGAGAAGGAAGCAAGGAAGCAAGTGCTTTGCATAGACCCTCAGATCCAATACCACCGGACCCTTCGCCACTGGCTGGTCTGCCAGAATTCTCACAACTGGGATGGGGTCACTGGTTCACCTTAAGAGACCTGGAACTTGCAACAATGCAATTTTCAAACGATAATATAATTGGGGAGGGAGGATATGGACTTGTTTATCGAGGTCATCTTATCAATGGAACACCTGTGGCTGTCAAAAAGCTTCTAAATCTAGGACAAGCGGAACGGGAATTCAGAGTGGAAGTCGAAGCATTTGGGCACGTGCGGCATAAGCACTTAGTTCGGCTGCTGGGGTACTGCATTGAAGGAACGCACAGGATATTAGTATACGAGTATGTGGACAATGGAAATCTGGAGCAGTGGCTTCATGGAGCTCTACGTCAGCATGGATATCTCACTTGGGAAGCACGAATCAGAATTCTCCTTGGTACTGCTAAGGCGCTGGCATATTTGCACGAGGCAATCGAACCAAAAATTGTGCATCGAGATATTAAGGCAAGCAACATATTGATTGATGACGAGTTTAATGCAAAACTATCAGACTTTGGTCTAGCCAAATTACTTGGTGCTGGGAAGAGTCATATAACCACCAGAGTGATGGGTACGTTTGGATATGTGGCGCCAGAATATGCAAAATCTGGACTTCTAAATGAAAAGAGTGATGTTTATAGCTTTGGAGTGGTCCTTTTGGAAGCAATTACTGGGAGAGACCCTGTTGATTATGGCCGCCCAACACATGAGGTAAATTTAGTGGATTGGCTAAAGATGATGGTAGGAAGCAAACGATCAGAAGAGGTAGTAGACCCAAATATAGAAAGAAAGCCATCAGTTAGTGAACTGAAGCGAGCTCTTTTAACTGCTTTGAGATGTGTGGATCCAGATGCCGATAAGAGGCCAAAGATGAGCCAAGTTGCCCGCATGCTCGAGTCCGAGGAATATCCAATTCCACGACAGGACTGGAAACCAAGAAAGGGCCATGCTAATGCAACCAAAATGGAGGCTGAGAAACAGGAGAGAGGACCCAGACGACACAGATAA 1428 44.61 MAPDLNTTLSKKTFVFGMKVWVFTGILVGVFIVVILVVLSICVSSRRKSRRVNGMLPINRTPAASKEIKDIGVDHVSAIQHDRFDTESEKVLLYSNKAYNYSISSSVDHTEIYAIGSGEGSKEASALHRPSDPIPPDPSPLAGLPEFSQLGWGHWFTLRDLELATMQFSNDNIIGEGGYGLVYRGHLINGTPVAVKKLLNLGQAEREFRVEVEAFGHVRHKHLVRLLGYCIEGTHRILVYEYVDNGNLEQWLHGALRQHGYLTWEARIRILLGTAKALAYLHEAIEPKIVHRDIKASNILIDDEFNAKLSDFGLAKLLGAGKSHITTRVMGTFGYVAPEYAKSGLLNEKSDVYSFGVVLLEAITGRDPVDYGRPTHEVNLVDWLKMMVGSKRSEEVVDPNIERKPSVSELKRALLTALRCVDPDADKRPKMSQVARMLESEEYPIPRQDWKPRKGHANATKMEAEKQERGPRRHR 475
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 80230106 80234350 - Tan0003422.1 Tan06g2813 757517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan06g2813 475 Gene3D Phosphorylase Kinase; domain 1 149 242 - -
Tan06g2813 475 SMART serkin_6 168 438 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan06g2813 475 FunFam Putative receptor-like serine/threonine-protein kinase 243 454 - -
Tan06g2813 475 ProSitePatterns Protein kinases ATP-binding region signature. 174 197 IPR017441 GO:0005524(InterPro)
Tan06g2813 475 MobiDBLite consensus disorder prediction 425 475 - -
Tan06g2813 475 Pfam Protein kinase domain 170 435 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan06g2813 475 Gene3D Transferase(Phosphotransferase) domain 1 243 451 - -
Tan06g2813 475 ProSiteProfiles Protein kinase domain profile. 168 444 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan06g2813 475 ProSitePatterns Serine/Threonine protein kinases active-site signature. 289 301 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan06g2813 475 PANTHER OS01G0323000 PROTEIN 1 465 IPR052232 -
Tan06g2813 475 MobiDBLite consensus disorder prediction 442 475 - -
Tan06g2813 475 FunFam serine/threonine-protein kinase PBS1-like 145 242 - -
Tan06g2813 475 CDD STKc_IRAK 174 439 - -
Tan06g2813 475 SUPERFAMILY Protein kinase-like (PK-like) 152 448 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan05g0624 Tan-Chr5:4631506 Tan06g2813 Tan-Chr6:80230106 2.50E-145 dispersed
Tan06g2813 Tan-Chr6:80230106 Tan08g0700 Tan-Chr8:6920820 3.20E-139 dispersed
Tan06g2813 Tan-Chr6:80230106 Tan02g0075 Tan-Chr2:923557 2.60E-149 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67828 PF00069 Pkinase 8.30E-48 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan06g2813 - - - 0.0