Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan06g2817 ATGGTGGACGAAAGTAAGATGATCGGTGAGCAGCTACAATTACGATTACGAATGCGATTGGGAAAGTACGAGCTGGGAAAAACTCTCGGCCAAGGCAATTTCGGAAAGGTCATATTTGCTAAAAACTTTGAAACTGACCAACCTTTTGCTCTTAAGGTCCTTGACAAGACCAAAATCAACGACCTCAACATCACCGATCAGATTAAAAGAGAAATACGCACCCTCAAACTTCTCAAGCATCCAAACGTAGTCAGACTACACGAGGTGTTGGGCAGCAAAAGCAAAATTTATATGGTTCTCGAGTACGTGAACGACGGAGAATTGTTTGATAGAATCGCATCCAAGGGGAAGCTATCCGAAGCCCAAGGCAGAAAAATCTTCCAGCAGTTAATTGATGGTGTGAGTTACTGCCATAGGAAAGGCGTTTTCCATAGGGATCTCAAGCTGGAGAACATACTTATTGATGCGAAGGGAAATATTAAGATATCTGACTTTGGGTTAAGTGCGTTACCCGAGCATTTTAGGGATGATGGTTTGCTTCACACAACCTGCGGAAGCCCAAACTACGTGGCACCTGAGATTCTGGCTAACAGAGGGTATGATGGTGCAAGCTCAGATATATGGTCCTGTGGGGTTATCTTGTATGTAATTCTTACAGGATCACTCCCTTTCGATGATAGAAATTTGTCTGTCCTTTACCATAAGATCCTTAAAGGAGAAACTCAGCTACCCAAGTGGTTGTCAGAAGGGGCCCGAAATTTGATCAGAAGGATTCTTGATCCCAACCCAATTTCTCGGATAAGTGTGGCAGGTATCAAAATGGACGAGTGGTTCAGAAAGGACTACGAGCCAGCCTACCTTGACGATGAAGAAGAGGATATATACACTGAAAATGAAACTGTGGCCATTTCAATAATGCATCAACTGAGTCCCACCACTTCCACTTCCAGTACTATAAATGCTTTTCAACTGATTGGAATGTCCTCGTGCCTGGACCTTTCCGGTTTCTTTGAGAAAGAGGACATTTCTCAGAGGAAGATCAGATTTACAACCAATCGCTACTCCGCAAAAGAAGATATCCTTGATCGGATGGAGGATCTTGTAACACAGATGGGGTTTCTTGTCCACAAGAAACCAGGAAGGTTGAAAGTAATGAGAGAGCACAAAGATCAGAATGGTGTGGCTAGTGTACTTTCGGTATCAGCAGAGGTTTTTGAGATAAGTCCATCACTATATGTCATAGAATTAAGAAAGTTGCGGGGAGATTCATCTTCATATAGACAGTTGTGTAAAATATTATCAAGTGATTTGGGTATCCCCTCTAGGCAAGACTCAGTGAATATCACATAG 1350 42.67 MVDESKMIGEQLQLRLRMRLGKYELGKTLGQGNFGKVIFAKNFETDQPFALKVLDKTKINDLNITDQIKREIRTLKLLKHPNVVRLHEVLGSKSKIYMVLEYVNDGELFDRIASKGKLSEAQGRKIFQQLIDGVSYCHRKGVFHRDLKLENILIDAKGNIKISDFGLSALPEHFRDDGLLHTTCGSPNYVAPEILANRGYDGASSDIWSCGVILYVILTGSLPFDDRNLSVLYHKILKGETQLPKWLSEGARNLIRRILDPNPISRISVAGIKMDEWFRKDYEPAYLDDEEEDIYTENETVAISIMHQLSPTTSTSSTINAFQLIGMSSCLDLSGFFEKEDISQRKIRFTTNRYSAKEDILDRMEDLVTQMGFLVHKKPGRLKVMREHKDQNGVASVLSVSAEVFEISPSLYVIELRKLRGDSSSYRQLCKILSSDLGIPSRQDSVNIT 449
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 80264138 80269205 - Tan0001494.1 Tan06g2817 757521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan06g2817 449 ProSitePatterns Protein kinases ATP-binding region signature. 29 52 IPR017441 GO:0005524(InterPro)
Tan06g2817 449 SMART serkin_6 23 278 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan06g2817 449 FunFam Non-specific serine/threonine protein kinase 316 440 - -
Tan06g2817 449 Gene3D Phosphorylase Kinase; domain 1 8 102 - -
Tan06g2817 449 Gene3D Transferase(Phosphotransferase) domain 1 103 306 - -
Tan06g2817 449 CDD CIPK_C 320 437 - -
Tan06g2817 449 ProSitePatterns Serine/Threonine protein kinases active-site signature. 142 154 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan06g2817 449 Pfam Protein kinase domain 23 278 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan06g2817 449 SUPERFAMILY Protein kinase-like (PK-like) 20 321 IPR011009 -
Tan06g2817 449 ProSiteProfiles Protein kinase domain profile. 23 278 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan06g2817 449 ProSiteProfiles NAF domain profile. 314 338 IPR018451 GO:0007165(InterPro)
Tan06g2817 449 Gene3D Kinase associated domain 1, KA1 314 439 - -
Tan06g2817 449 FunFam Non-specific serine/threonine protein kinase 16 317 - -
Tan06g2817 449 FunFam Non-specific serine/threonine protein kinase 14 102 - -
Tan06g2817 449 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 19 427 - GO:0004674(PANTHER)|GO:0006468(PANTHER)|GO:0007165(PANTHER)
Tan06g2817 449 Pfam NAF domain 317 377 IPR004041 GO:0007165(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan06g2817 Tan-Chr6:80264138 Tan10g1130 Tan-Chr10:10956116 4.70E-156 dispersed
Tan06g2817 Tan-Chr6:80264138 Tan05g2668 Tan-Chr5:78077264 3.50E-119 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67829 PF00069 Pkinase 1.50E-71 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan06g2817 K07198 - csv:101206030 665.225