Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tan06g2824 | ATGTGGGAACCCTCACCCTCCTCTATGGTGTGGTCATTTTTCATTCTTTCACTGTCCATTCTTTTCCTTGCAAAAACACTCAAAAATCGAAAATACACGGGCCGAGATCAGTGTTGTCGGAGTCAGAGGGCATACAGATTTCCTCCAGGGAGAAGAAGCTGGCCTGTAATAGGTGATAGCTTCAACTGGTACAGTGCGGTTGCAAGTTCTCACCCCCCCAAGTATGTCGAAGAACAGGCCAAAAGGTACGGGAAGATCTTCTCGTGCCGTGTGTTTGGAAAATGGGCAGTGGTATCGGCGGATCCGGTGTTTAACAGGTATGTGATGCAAAACGAAGGGAAATTGTTCCAATCGAGCTATCCAAAATCTTTCAGAGATTTGGTAGGGATGAACGGTGTCATCACAGTACAAGGGGAACAACAAAGAAAACTGCATGCAATTGCCTCCAATATGATGCGTGTAGACAAACTCAAGTTTCGGTTCCTACAAGATATTCAAGCCATAATGATCCATACCTTGTGCAGTTTCCATAACGATCAAGTGATATTTCTCCAAGATGTTTGCAGGAAGATGGCCATTAATCTTATGGTAAGTCAGCTATTGGGTGTGTCGAGTGAATCGGAAGTCAATGAGATTAGTCGGTTATTTTACGACTTCGTTGATGGCTGTCTATCTATTCCTATCAACTTACCTGGCTTTGCCTATTACTCGGCCATGAAGGCAAGGGAGCAAATCATAAACAAAATTAACAAAAAAATAGAGATGCACAAGTCGAGCATAGCACTGGAAACGAGCGGAGAGGGAGTGCTCGCAGGACTATTAAAGGAGCAAAACTTATCTGATGAGGCCGTTGCAGATTTCATTATCAATCTTCTTTTTGCTGGAAACGAAACAACTTCTAAAACAATGCTCTTCGCAGTCTATTTCCTAACCCACTCACCTAAAGCAATGAACCAACTTGTGGATGAACAAGATGCTCTAAGAAACAAGTATGGAGATCATACAATCACATGGCAGGATTACAAATCAATGTCCTTTACCCAGTGTGTTATTGATGAGACACTTCGACTAGGAGGAATTGCGATTTGGTTGATGAGGGAGGCAAAAGAAGAGATCAAGTATTCAGATTATGTTATTCCGAAGGGAACTTTTGTTGTTCCATTTCTTTCTGCTGTACATTTGGACGAGACTATATATGAAGGAGCTTTAACTTTCAATCCTTGGAGATGGATGGAGCTTCAAAATCAGGAAATGAGAAATTGGAGGAGTGGCCCATTTTTTGCTCCATTCGGAGGAGGTGCTAGATTGTGTCCCGGAGCAGAATTGGCGCGTCTCCAAATTGCTTTATTTCTCCACCACTTTGTTACCAAGTATAGGTGGACCCAAATTAAAGCAGATAGGATGTCTTTCTTTCCCTCTGCTCGGCTAGTCAACGGCTTCCAAATTCAGTTATTTCCATCCATTTCATGCACTAAATCTTGTCATTATCAATCTATAAAAAGGAGAAGAAAGGAGAAAACGAAGGTAGGGGTTGATGCTGCAGCAACTTCCAGTCTCTCATTCTGCAACTCATGA | 1575 | 42.48 | MWEPSPSSMVWSFFILSLSILFLAKTLKNRKYTGRDQCCRSQRAYRFPPGRRSWPVIGDSFNWYSAVASSHPPKYVEEQAKRYGKIFSCRVFGKWAVVSADPVFNRYVMQNEGKLFQSSYPKSFRDLVGMNGVITVQGEQQRKLHAIASNMMRVDKLKFRFLQDIQAIMIHTLCSFHNDQVIFLQDVCRKMAINLMVSQLLGVSSESEVNEISRLFYDFVDGCLSIPINLPGFAYYSAMKAREQIINKINKKIEMHKSSIALETSGEGVLAGLLKEQNLSDEAVADFIINLLFAGNETTSKTMLFAVYFLTHSPKAMNQLVDEQDALRNKYGDHTITWQDYKSMSFTQCVIDETLRLGGIAIWLMREAKEEIKYSDYVIPKGTFVVPFLSAVHLDETIYEGALTFNPWRWMELQNQEMRNWRSGPFFAPFGGGARLCPGAELARLQIALFLHHFVTKYRWTQIKADRMSFFPSARLVNGFQIQLFPSISCTKSCHYQSIKRRRKEKTKVGVDAAATSSLSFCNS | 524 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 6 | 80498597 | 80513683 | - | Tan0000961.1 | Tan06g2824 | 757528 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tan06g2824 | 524 | Gene3D | Cytochrome P450 | 37 | 485 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan06g2824 | 524 | PANTHER | CYTOCHROME P450 26 | 46 | 463 | - | GO:0004497(PANTHER)|GO:0007275(PANTHER)|GO:0010268(PANTHER)|GO:0016125(PANTHER)|GO:0016132(PANTHER)|GO:0016491(PANTHER) | |
| Tan06g2824 | 524 | PRINTS | E-class P450 group IV signature | 377 | 391 | IPR002403 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan06g2824 | 524 | PRINTS | E-class P450 group IV signature | 421 | 437 | IPR002403 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan06g2824 | 524 | PRINTS | E-class P450 group IV signature | 74 | 97 | IPR002403 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan06g2824 | 524 | PRINTS | E-class P450 group IV signature | 285 | 311 | IPR002403 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan06g2824 | 524 | PRINTS | E-class P450 group IV signature | 437 | 455 | IPR002403 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan06g2824 | 524 | PRINTS | E-class P450 group IV signature | 344 | 360 | IPR002403 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan06g2824 | 524 | PRINTS | E-class P450 group IV signature | 393 | 411 | IPR002403 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan06g2824 | 524 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 430 | 439 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Tan06g2824 | 524 | CDD | CYP90-like | 81 | 486 | - | - | |
| Tan06g2824 | 524 | Pfam | Cytochrome P450 | 48 | 465 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan06g2824 | 524 | SUPERFAMILY | Cytochrome P450 | 41 | 485 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan06g2824 | 524 | PRINTS | P450 superfamily signature | 428 | 437 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan06g2824 | 524 | PRINTS | P450 superfamily signature | 437 | 448 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan06g2824 | 524 | PRINTS | P450 superfamily signature | 349 | 360 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan06g2824 | 524 | PRINTS | P450 superfamily signature | 294 | 311 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Tan06g2824 | Tan-Chr6:80498597 | Tan11g0677 | Tan-Chr11:5902421 | 4.60E-70 | dispersed | |
| Tan06g2824 | Tan-Chr6:80498597 | Tan06g0181 | Tan-Chr6:1603976 | 8.30E-80 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tan06g2824 | - | - | - | 0.0 |