Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan07g0027 ATGGAGCAAGGATCTGGTGCTTCCACTTCTTCCACCCCTTCTCAGTTTTCGCGAGCATTCCTCACTAGGAATCTAATACTCGCATACCAAAGTTTTGGAGTAGTGTATGGAGATTTGAGCACTTCACCCCTCTACGTTTACTCGAGTACATTTGCGGGGAAGTTGCAGAAACACCGAACTGAGGAAGTAGTATTTGGTGCATTCTCCTTGATCTTCTGGACTTTTACACTGATACCATTATTGAAGTATGTCTTCATTGTATTGAGCGCAGATGACAATGGTGAAGGAGGAACCTTTGCTCTTTACTCCCTGCTCTGTCGACATGCTAAGTTGAGTTTACTTCCTAACCAACAAGCAGCGGATGAGGAGCTCTCAGCTTACAAATATGGTCCATCTTCTCACGTAGTAGCCTCTTCTGCACTAAAAAGGTTTCTGGAAAGGCATAAAACACTTAGGACGGTCTTACTTCTTGTCGTATTATTTGGTGCTTGCATGGTCATTGGTGATGGCGTGCTAACCCCTGCAATTTCAGTTCTATCCTCAGTTTCAGGTTTACAAGTTACTGAAGCAAAATTGACCAATGGGACACTCCTTTTGATTGCGTGTGCCATATTGGTTGGCCTGTTTGCTCTGCAGCATTGTGGCACCCATAAGGTTGCATTTATGTTTGCTCCAATAGTGATCATCTGGTTGCTGTCAATTTTCTCCATTGGTCTGTACAACATAATACACTGGAACCCAAGTATTATACGTGCAATTTCCCCTCATTATGTTATCAAGTTCTTGAGAGTCACTGGTAAAGATGGTTGGCTTTCTCTCGGAGGGGTTCTTCTGGCCATAACTGGTACTGAAGCGATGTTTGCAGATCTTGGTCATTTCACTGCTTTGTCTATAAGGCTTGCATTTGCATTCGTTATCTACCCTTGTTTGGTAGTACAATACATGGGTCAAGCTGCCTTTCTGTCTAAGAACCTTGAATTGTTTCCAAACAGTTTTTATGACTCAATTCCTGAACCTGTATTTTGGCCTGTTTTTGTTATTGCCACCCTTGCGGCTATTGTGGGGAGCCAGGCTGTCATTACTGCTACTTTCTCTATTGTCAAACAATGCCATGCCCTTGGTTGCTTTCCAAGAGTGAAAGTTGTCCATACCTCTAAACACATATATGGGCAGATCTACATCCCAGAAATAAACTGGATATTAATGGTCCTCACTCTTTCCATTACAATAGGGTTTCAAGATACGACACTGATTGGAAATGCTTATGGACTTGCCTGCATGACAGTTATGTTCACGACGACATTTCTCATGGCACTTGTCATACTATTCGTTTGGCAAAAAAGTATCCTGCTGGCTGCACCTTTTATCATCTTCTTCTGGGCTGTCGAGGGTGCCTACTTATCAGCAGCAATCATAAAAGTGCCTCAAGGAGGGTGGGTCCCGCTTGTGCTGTCAGCCATTTTTATGATTGTTATGTTTGTCTGGCATTATGGCACTCGCAAGAAGTACAACTTTGATCTACATAATAAAGTTTCACTGAAGTGGTTGCTCGGACTAGGCCCTAGCCTTGGTATAGTTCGTGTCCCTGGGATTGGTCTCATATACTCGGAATTGGCAGCCGGAGTTCCAGCAATATTTTCTCACTTTGTGACAAATCTCCCTGCATTTCACAAAGTTTTAGTCTTTGTTTGTGTAAAGTCTGTTCCTGTTCCATATGTCTCACCCGAAGAACGTTTTCTCATTGGGAGAGTCTGTCCTAGACCATATCGCATGTATCGGTGCATAGTGAGGTATGGCTACAAGGACATTCAGAAGGATGATGGGGATTTTGAGAACCAGCTGATACTAAACATTGCAGAATTTATTCAAATGGAGGCAGAGGAACCACAATTCTCAAACTCTGAAAGTTCTTCAATTGATGGGAGGATGGCTGTAATAAGCACTCGGAGCATACAATCAAGCTTGAGTTTCATAGTGTCGGGGCATGAAGAAGTTGGTACCAGCAACACCATCCACAGTAGCAAATCTGCCACACTCCATAGTTTACGATCTGCCTATGAGGAAGAGAATCCACAACTAAGAAGGCGCCAAGTAAGGTTTCAGCTATCTCCCAGCCCTTCAATGGACCCTAGAGTTAAGGAAGAGTTGGTGGACTTGATCCAAGCCAAAGAGGCCGGTGTAGCATATATAATGGGACACTCATATGTCAAGGCTCGAAGATCTTCGTCGTATTTGAAAAAGCTTGTAATAGATATAGGCTACTCGTTCCTCCGAAAGAACTGCAGAGGCCCCTCTGTTGCGCTTAACATCCCTCACATCAGTCTAATTGAAGTGGGGATGATATATTATGTTTAG 2355 43.35 MEQGSGASTSSTPSQFSRAFLTRNLILAYQSFGVVYGDLSTSPLYVYSSTFAGKLQKHRTEEVVFGAFSLIFWTFTLIPLLKYVFIVLSADDNGEGGTFALYSLLCRHAKLSLLPNQQAADEELSAYKYGPSSHVVASSALKRFLERHKTLRTVLLLVVLFGACMVIGDGVLTPAISVLSSVSGLQVTEAKLTNGTLLLIACAILVGLFALQHCGTHKVAFMFAPIVIIWLLSIFSIGLYNIIHWNPSIIRAISPHYVIKFLRVTGKDGWLSLGGVLLAITGTEAMFADLGHFTALSIRLAFAFVIYPCLVVQYMGQAAFLSKNLELFPNSFYDSIPEPVFWPVFVIATLAAIVGSQAVITATFSIVKQCHALGCFPRVKVVHTSKHIYGQIYIPEINWILMVLTLSITIGFQDTTLIGNAYGLACMTVMFTTTFLMALVILFVWQKSILLAAPFIIFFWAVEGAYLSAAIIKVPQGGWVPLVLSAIFMIVMFVWHYGTRKKYNFDLHNKVSLKWLLGLGPSLGIVRVPGIGLIYSELAAGVPAIFSHFVTNLPAFHKVLVFVCVKSVPVPYVSPEERFLIGRVCPRPYRMYRCIVRYGYKDIQKDDGDFENQLILNIAEFIQMEAEEPQFSNSESSSIDGRMAVISTRSIQSSLSFIVSGHEEVGTSNTIHSSKSATLHSLRSAYEEENPQLRRRQVRFQLSPSPSMDPRVKEELVDLIQAKEAGVAYIMGHSYVKARRSSSYLKKLVIDIGYSFLRKNCRGPSVALNIPHISLIEVGMIYYV 784
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 2196538 2203658 - Tan0006551.1 Tan07g0027 757558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan07g0027 784 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 22 784 IPR003855 GO:0006813(PANTHER)|GO:0015079(InterPro)|GO:0015079(PANTHER)|GO:0016020(PANTHER)|GO:0016020(InterPro)|GO:0071805(InterPro)
Tan07g0027 784 Pfam K+ potassium transporter integral membrane domain 27 516 IPR053951 -
Tan07g0027 784 Pfam K+ potassium transporter C-terminal domain 529 782 IPR053952 -
Tan07g0027 784 NCBIfam potassium uptake protein 27 784 IPR003855 GO:0015079(InterPro)|GO:0016020(InterPro)|GO:0071805(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan05g3037 Tan-Chr5:82332079 Tan07g0027 Tan-Chr7:2196538 1.30E-159 dispersed
Tan07g0027 Tan-Chr7:2196538 Tan11g0608 Tan-Chr11:5393187 1.50E-247 dispersed
Tan07g0027 Tan-Chr7:2196538 Tan07g1332 Tan-Chr7:62505389 1.60E-257 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan07g0027 K03549 - csv:101208973 1474.53