Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan07g0045 ATGCTTCCCAAATCCACCGGAATCCTCTGGCTCGACGGCGACCATGACGACGCCGCTTCTTGGACCAGAACCACCAACGACCCTGACGACGACATCGCCATTGCCGGCTCCATTTCCTCCTTCAAATCCATGCTTGAATCCGACTGGTACGTCAACTCTTCTACTCCTCTCAATCCCTCTCACCAACATTTCCATTCCCTCTCTTCTTCTCACAACCACATTCCGGACCTTGCCTTCTCCTCCAATCCCACTGATAACCTGCTCTTGCACCCCATAGACTCTTCCTCTTCCTGCTCTCCCTCCCACGCTTTTGCTCTCGATCCTTCCCATTCCCACAAATCCTGTTTCTCTTCTCTTCTTAATGTCGTTTGCGGAAGTAATTTTGATAATGCCTTCGATTTGGGCGGCGACACTGGCCTGCTTGGATCTTACCAGGGGAATCAACCTTCCAATTCCTCCGTTTTGATGGGATTTACCGGTATTTCGTCTCTTCCTCATATCGGTAATCAGGAACTTAGCTTAAACCACTCCGAGTTTCCGCCCACTCGGTTGCTTCCGGTAGCCGATAACCCTCCCGCATTCGGCGCTGGGTATAATCCGGAGACTGCCTTCGAGAGCTTCGATGGCTGCGGGAATGCTCTGTTTCAGACCAGGTCTAAGGTTTTGAGACCTCTCGAAGTGTTCCCGCAGGTAGGCGCTCAGCCGACGCTGTTTCAGAAGCGGGCGGCGCATCGAGTTGGCTCTGCCGGAGCTGATAAACTGGAGAATTTGGAGGTTTCGGGGTTGAAATTTGGAGAAGGCTCAATGTGGACGCCGAATTTAGAGAAGCTGAGGAACAAGAATGGCGACGAGGACATTGAGGACGGCAGCGTGGATGTTTCACGGTTGAATTACGATTCCGATGAAGCCAATGAGTATAACAAGCAAGAGGACAATGTTAATGCTAAAAACTGCGGAAGCAATTCCAATGCCAACAGCACCGTAACCGGAGGAGACCAGAAGGGGAAGAAGAAGGGGCTGCCGGCGAAGAATCTCATGGCGGAACGGCGGCGGAGAAAGAAGCTGAATGATAGACTTTACATGCTTAGGTCCGTCGTACCCAAAATAAGCAAGATGGATAGAGCTTCAATACTTGGAGACGCCATCGATTACTTGAAGGAGCTTCTTCAAAGGATAAATGATCTTCATAATGAACTTGAATCGACTCCTCCTGGTTCTTTGTTGCAGCCTTCTGCAAGCTTTCATCCTTTGACGCCAACGCTGCCGACTCTTCCCTGTCGTGTCAAAGAAGAGCTGTGTCCAAGCTCCTTGTCCAGCCCCAAAACCCAGCCTGCCAGGGTTGAAGTCCGGGTCAGAGAAGGCAGAGCTGTCAATATTCACATGTTTTGTTCTCGCAAGCCGGGTCTCTTGCTATCCACCATGAGGGCTCTGGATAACCTCGGCTTGGACATCCAACAAGCTGTAATCAGCTGTTTCAATGGCTTTGCTTTAGACGTGTTTCGAGCCGAGCAATCCAAGGAAGGTCAGGAGATCTTACCTGAGCAAATAAAAGCAGTGCTGTTGGATTCAGCTGGTTTACATGGTGTTATTTAA 1593 50.35 MLPKSTGILWLDGDHDDAASWTRTTNDPDDDIAIAGSISSFKSMLESDWYVNSSTPLNPSHQHFHSLSSSHNHIPDLAFSSNPTDNLLLHPIDSSSSCSPSHAFALDPSHSHKSCFSSLLNVVCGSNFDNAFDLGGDTGLLGSYQGNQPSNSSVLMGFTGISSLPHIGNQELSLNHSEFPPTRLLPVADNPPAFGAGYNPETAFESFDGCGNALFQTRSKVLRPLEVFPQVGAQPTLFQKRAAHRVGSAGADKLENLEVSGLKFGEGSMWTPNLEKLRNKNGDEDIEDGSVDVSRLNYDSDEANEYNKQEDNVNAKNCGSNSNANSTVTGGDQKGKKKGLPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHNELESTPPGSLLQPSASFHPLTPTLPTLPCRVKEELCPSSLSSPKTQPARVEVRVREGRAVNIHMFCSRKPGLLLSTMRALDNLGLDIQQAVISCFNGFALDVFRAEQSKEGQEILPEQIKAVLLDSAGLHGVI 530
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 2562406 2565706 - Tan0002058.1 Tan07g0045 757576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan07g0045 530 ProSiteProfiles ACT domain profile. 458 530 IPR002912 -
Tan07g0045 530 FunFam BHLH transcription factor 335 403 - -
Tan07g0045 530 CDD ACT_UUR-ACR-like 459 519 - -
Tan07g0045 530 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 296 525 IPR051358 GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0006355(PANTHER)|GO:0043565(PANTHER)
Tan07g0045 530 SMART finulus 345 394 IPR011598 GO:0046983(InterPro)
Tan07g0045 530 CDD bHLH_AtAMS_like 342 406 - -
Tan07g0045 530 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 342 407 IPR036638 GO:0046983(InterPro)
Tan07g0045 530 Pfam Helix-loop-helix DNA-binding domain 346 388 IPR011598 GO:0046983(InterPro)
Tan07g0045 530 MobiDBLite consensus disorder prediction 312 339 - -
Tan07g0045 530 Coils Coil 382 402 - -
Tan07g0045 530 Pfam Plant bHLH transcription factor, ACT-like domain 447 520 IPR054502 -
Tan07g0045 530 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 339 388 IPR011598 GO:0046983(InterPro)
Tan07g0045 530 MobiDBLite consensus disorder prediction 312 332 - -
Tan07g0045 530 Gene3D - 333 402 IPR036638 GO:0046983(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan05g3011 Tan-Chr5:82028499 Tan07g0045 Tan-Chr7:2562406 3.60E-134 dispersed
Tan07g0045 Tan-Chr7:2562406 Tan09g1736 Tan-Chr9:68878886 1.80E-13 dispersed
Tan07g0045 Tan-Chr7:2562406 Tan02g2508 Tan-Chr2:93674442 1.10E-34 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
27865 PF00010 HLH 2.20E-09 No_clan Tan TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan07g0045 - - - 0.0