Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan07g0080 ATGGATCCTAAAACCTCATCAACAACAACATCAAGAACAAAGCAGCCCGAAGAAGTGGTACCCAACTTTTTGAACTTCCATCAAGAAGAAGAATCAATCATGGGTGAAAACAAACCAGCTGAAATCAAAGATTTCCAAATAGCAATTGCAGAGAAAGAAGAAGGGAAAAAACAGTTAGCCCCAAAAAGAAGCTCGAACAAAGACCGTCACACCAAAGTCGAAGGCCGAGGCCGAAGAATCCGGATGCCGGCTCTTTGTGCGGCGAGGATTTTTCAATTGACGAGGGAATTGGGTCATAAATCCGATGGTGAAACCATCCAGTGGCTGCTACAGCAAGCGGAGCCGTCGATAATCGCCGCCACTGGTACCGGAACCATCCCGGCTTCAGCCTTAGCGGCGGCGGCGGGTTCCGTTTCGCAACAGGGGGCTTCTCTTTCCGCCGGATTGCAACAAAAATTGGAGGAATTAAGCGCTGGCGGGTCCAGTAGGGCCAATTGGGGCAATTTTGGGCGACCCCATTTGGCCGCCACAGCCACAGCGCTTTGGCCCTCCTCTGTCAGTGGCTTTGGGTTTCAGTCATCAACTGCTGCTGTTTGTGCTTCTGGTGTTGCTCAATCAGCCACTAATTTAGCTAATGAAACTTCAAATTACTTTCACAAACTTGGCTTCCCACCCTTTGACTTACCCCCCACCAACATGGGTCCTATGAGTTTCACCTCCATTTTAGGTGCAAACACTCAACAGTTACCTGGTTTAGAGCTTGGATTGTCCCAAGAGGGCCATATTGGGGCTATAAATCCTCAAGCATTGAACCAGATTTACCAACAGATGGGACAAGCTAGAGTTCATCAGCATCATCATCAACAGCAACCTCCTGCTAAGGATGATTCTCAAGATTCAGGGTAG 906 48.57 MDPKTSSTTTSRTKQPEEVVPNFLNFHQEEESIMGENKPAEIKDFQIAIAEKEEGKKQLAPKRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEPSIIAATGTGTIPASALAAAAGSVSQQGASLSAGLQQKLEELSAGGSSRANWGNFGRPHLAATATALWPSSVSGFGFQSSTAAVCASGVAQSATNLANETSNYFHKLGFPPFDLPPTNMGPMSFTSILGANTQQLPGLELGLSQEGHIGAINPQALNQIYQQMGQARVHQHHHQQQPPAKDDSQDSG 301
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 2962588 2965148 - Tan0002573.1 Tan07g0080 757611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan07g0080 301 MobiDBLite consensus disorder prediction 277 301 - -
Tan07g0080 301 MobiDBLite consensus disorder prediction 52 75 - -
Tan07g0080 301 MobiDBLite consensus disorder prediction 1 20 - -
Tan07g0080 301 Pfam TCP family transcription factor 65 152 IPR017887 -
Tan07g0080 301 ProSiteProfiles TCP domain profile. 66 120 IPR017887 -
Tan07g0080 301 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 10 291 IPR005333 GO:0003700(InterPro)|GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0043565(PANTHER)
Tan07g0080 301 MobiDBLite consensus disorder prediction 1 18 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan03g1094 Tan-Chr3:67128206 Tan07g0080 Tan-Chr7:2962588 3.20E-27 dispersed
Tan07g0080 Tan-Chr7:2962588 Tan09g2130 Tan-Chr9:71602131 8.50E-29 dispersed
Tan07g0080 Tan-Chr7:2962588 Tan07g0081 Tan-Chr7:2962588 2.00E-158 tandem
Tan06g2129 Tan-Chr6:70499293 Tan07g0080 Tan-Chr7:2962588 2.30E-29 transposed
Tan06g1482 Tan-Chr6:20283738 Tan07g0080 Tan-Chr7:2962588 1.40E-57 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
27869 PF03634 TCP 2.90E-31 No_clan Tan TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan07g0080 - - - 0.0