Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan07g0081 | ATGGATCCTAAAACCTCATCAACAACAACATCAAGAACAAAGCAGCCCGAAGAAGTGGTACCCAACTTTTTGAACTTCCATCAAGAAGAAGAATCAATCATGGGTGAAAACAAACCAGCTGAAATCAAAGATTTCCAAATAGCAATTGCAGAGAAAGAAGAAGGGAAAAAACAGTTAGCCCCAAAAAGAAGCTCGAACAAAGACCGTCACACCAAAGTCGAAGGCCGAGGCCGAAGAATCCGGATGCCGGCTCTTTGTGCGGCGAGGATTTTTCAATTGACGAGGGAATTGGGTCATAAATCCGATGGTGAAACCATCCAGTGGCTGCTACAGCAAGCGGAGCCGTCGATAATCGCCGCCACTGGTACCGGAACCATCCCGGCTTCAGCCTTAGCGGCGGCGGCGGGTTCCGTTTCGCAACAGGGGGCTTCTCTTTCCGCCGGATTGCAACAAAAATTGGAGGAATTAAGCGCTGGCGGGTCCAGTAGGGCCAATTGGGGCAATTTTGGGCGACCCCATTTGGCCGCCACAGCCACAGCGCTTTGGCCCTCCTCTGTCAGTGGCTTTGGGTTTCAGTCATCAACTGCTGCTGTTTGTGCTTCTGGTGTTGCTCAATCAGCCACTAATTTAGCTAATGAAACTTCAAATTACTTTCACAAACTTGGCTTCCCACCCTTTGACTTACCCCCCACCAACATGGGTCCTATGAGTTTCACCTCCATTTTAGGTGCAAACACTCAACAGTTACCTGGTTTAGAGCTTGGATTGTCCCAAGAGGGCCATATTGGGGCTATAAATCCTCAAGCATTGAACCAGATTTACCAACAGATGGGACAAGCTAGAGTTCATCAGCATCATCATCAACAGCAACCTCCTGCTAAGGATGATTCTCAAGATTCAGGGTAG | 906 | 48.57 | MDPKTSSTTTSRTKQPEEVVPNFLNFHQEEESIMGENKPAEIKDFQIAIAEKEEGKKQLAPKRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEPSIIAATGTGTIPASALAAAAGSVSQQGASLSAGLQQKLEELSAGGSSRANWGNFGRPHLAATATALWPSSVSGFGFQSSTAAVCASGVAQSATNLANETSNYFHKLGFPPFDLPPTNMGPMSFTSILGANTQQLPGLELGLSQEGHIGAINPQALNQIYQQMGQARVHQHHHQQQPPAKDDSQDSG | 301 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 2962588 | 2965148 | - | Tan0002573.2 | Tan07g0081 | 757612 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan07g0081 | 301 | MobiDBLite | consensus disorder prediction | 277 | 301 | - | - | |
Tan07g0081 | 301 | MobiDBLite | consensus disorder prediction | 52 | 75 | - | - | |
Tan07g0081 | 301 | MobiDBLite | consensus disorder prediction | 1 | 20 | - | - | |
Tan07g0081 | 301 | Pfam | TCP family transcription factor | 65 | 152 | IPR017887 | - | |
Tan07g0081 | 301 | ProSiteProfiles | TCP domain profile. | 66 | 120 | IPR017887 | - | |
Tan07g0081 | 301 | PANTHER | TRANSCRIPTION FACTOR TCP4-RELATED | 10 | 291 | IPR005333 | GO:0003700(InterPro)|GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0043565(PANTHER) | |
Tan07g0081 | 301 | MobiDBLite | consensus disorder prediction | 1 | 18 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan06g1482 | Tan-Chr6:20283738 | Tan07g0081 | Tan-Chr7:2962588 | 1.40E-57 | dispersed | |
Tan06g2129 | Tan-Chr6:70499293 | Tan07g0081 | Tan-Chr7:2962588 | 2.30E-29 | dispersed | |
Tan07g0081 | Tan-Chr7:2962588 | Tan09g2130 | Tan-Chr9:71602131 | 8.50E-29 | dispersed | |
Tan07g0080 | Tan-Chr7:2962588 | Tan07g0081 | Tan-Chr7:2962588 | 2.00E-158 | tandem |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
27870 | PF03634 | TCP | 2.90E-31 | No_clan | Tan | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan07g0081 | - | - | - | 0.0 |