Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan07g0087 ATGGAGAATTATCAGATGTTTTTCCCTTGCTCCGACGGCGGCGGGCTGTCGGCTTATCATCATGCCGCCGACATGTCGTCCAGCGGCGGGTCTGATATGATGTTCGCGAGTTTTCACGGCGGCGATCTGCAGGAAAGTGGGTTTTTGGGACTGAAGACGGAGGTGGATGCGGCGGCGGCGGTGGAAGCCGACAGCCATAGCGGCGGCGGAAAAAAGAAAGGGGAGAAGAAGGTGAGGAAACCGAGATATGCTTTTCAGACAAGAAGCCAAGTTGACATTCTTGACGATGGTTATCGTTGGAGGAAATATGGTCAAAAAGCTGTCAAAAACAACAAGTTTCCTAGGAGCTATTATAGGTGCACATATCAAGGTTGCAATGTGAAGAAACAAGTACAAAGGCTAACAAGAGATGAAGGGGTGGTGGTGACAACATATGAAGGCATGCACACACACTCCATTGATAAGCCAACAGACAACTTTGAACAAATCTTGAGTAGAATGCAAATTTACAGTACTCCTTTCTGA 525 47.81 MENYQMFFPCSDGGGLSAYHHAADMSSSGGSDMMFASFHGGDLQESGFLGLKTEVDAAAAVEADSHSGGGKKKGEKKVRKPRYAFQTRSQVDILDDGYRWRKYGQKAVKNNKFPRSYYRCTYQGCNVKKQVQRLTRDEGVVVTTYEGMHTHSIDKPTDNFEQILSRMQIYSTPF 174
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 3097719 3100555 + Tan0016303.1 Tan07g0087 757618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan07g0087 174 ProSiteProfiles WRKY domain profile. 89 154 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Tan07g0087 174 Gene3D WRKY domain 77 154 IPR036576 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Tan07g0087 174 FunFam WRKY transcription factor 57 80 154 - -
Tan07g0087 174 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 66 154 IPR044810 GO:0003700(InterPro)
Tan07g0087 174 SMART WRKY_cls 94 153 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Tan07g0087 174 SUPERFAMILY WRKY DNA-binding domain 86 153 IPR036576 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Tan07g0087 174 Pfam WRKY DNA -binding domain 95 151 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan03g1377 Tan-Chr3:70290920 Tan07g0087 Tan-Chr7:3097719 3.70E-28 dispersed
Tan07g0087 Tan-Chr7:3097719 Tan10g1324 Tan-Chr10:15803838 9.90E-46 dispersed
Tan07g0087 Tan-Chr7:3097719 Tan07g0088 Tan-Chr7:3097719 8.80E-95 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
27871 PF03106 WRKY 5.50E-26 CL0274 Tan TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan07g0087 - - - 0.0