Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan07g0087 | ATGGAGAATTATCAGATGTTTTTCCCTTGCTCCGACGGCGGCGGGCTGTCGGCTTATCATCATGCCGCCGACATGTCGTCCAGCGGCGGGTCTGATATGATGTTCGCGAGTTTTCACGGCGGCGATCTGCAGGAAAGTGGGTTTTTGGGACTGAAGACGGAGGTGGATGCGGCGGCGGCGGTGGAAGCCGACAGCCATAGCGGCGGCGGAAAAAAGAAAGGGGAGAAGAAGGTGAGGAAACCGAGATATGCTTTTCAGACAAGAAGCCAAGTTGACATTCTTGACGATGGTTATCGTTGGAGGAAATATGGTCAAAAAGCTGTCAAAAACAACAAGTTTCCTAGGAGCTATTATAGGTGCACATATCAAGGTTGCAATGTGAAGAAACAAGTACAAAGGCTAACAAGAGATGAAGGGGTGGTGGTGACAACATATGAAGGCATGCACACACACTCCATTGATAAGCCAACAGACAACTTTGAACAAATCTTGAGTAGAATGCAAATTTACAGTACTCCTTTCTGA | 525 | 47.81 | MENYQMFFPCSDGGGLSAYHHAADMSSSGGSDMMFASFHGGDLQESGFLGLKTEVDAAAAVEADSHSGGGKKKGEKKVRKPRYAFQTRSQVDILDDGYRWRKYGQKAVKNNKFPRSYYRCTYQGCNVKKQVQRLTRDEGVVVTTYEGMHTHSIDKPTDNFEQILSRMQIYSTPF | 174 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 3097719 | 3100555 | + | Tan0016303.1 | Tan07g0087 | 757618 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan07g0087 | 174 | ProSiteProfiles | WRKY domain profile. | 89 | 154 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Tan07g0087 | 174 | Gene3D | WRKY domain | 77 | 154 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Tan07g0087 | 174 | FunFam | WRKY transcription factor 57 | 80 | 154 | - | - | |
Tan07g0087 | 174 | PANTHER | WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED | 66 | 154 | IPR044810 | GO:0003700(InterPro) | |
Tan07g0087 | 174 | SMART | WRKY_cls | 94 | 153 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Tan07g0087 | 174 | SUPERFAMILY | WRKY DNA-binding domain | 86 | 153 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Tan07g0087 | 174 | Pfam | WRKY DNA -binding domain | 95 | 151 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan03g1377 | Tan-Chr3:70290920 | Tan07g0087 | Tan-Chr7:3097719 | 3.70E-28 | dispersed | |
Tan07g0087 | Tan-Chr7:3097719 | Tan10g1324 | Tan-Chr10:15803838 | 9.90E-46 | dispersed | |
Tan07g0087 | Tan-Chr7:3097719 | Tan07g0088 | Tan-Chr7:3097719 | 8.80E-95 | tandem |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
27871 | PF03106 | WRKY | 5.50E-26 | CL0274 | Tan | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan07g0087 | - | - | - | 0.0 |