Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan07g0140 ATGGAAGTGCACAATCATGATCATGGTCACATAATTGAGGTATGTGGAGATGTGCAAGCTGTAGGGCCTAGTATTGTGGGAAGTAAAATTTGTGGGGAGGCACCTTCCTGTGGATTTTCTGATGCAAAAAATAGTTCGAAAGATGCGAAGGAGCGATCTGCATCCATGCGCAAGCTTTTCATAGCAGTTGTTCTCTGCATCGTTTTCATGAGCGTGGAAGTAGTTGGAGGTATTAAAGCAAACAGTCTTGCAATATTGACAGATGCTGCTCATTTGTTATCAGATGTTGCTGCTTTTGCCATTTCTTTGTTTTCACTCTGGGCCTCTGGTTGGGAGGCAACTCCACGTCAGTCATATGGCTTCTTCCGGATTGAAATACTCGGTGCCCTCGTTTCCATTCAGATGATCTGGCTTCTTGCTGGAATTCTAGTTTACGAAGCTATTGTCCGACTTATCAACGGTCCAGGAGAAGTCAAGGGGTTGCTCATGTTTGCTGTTTCTGCATTCGGGTTAGTTGTTAATATAGCTATGGCTCTGCTGCTTGGTCACGAACATGGTCATGCCCATTCTCATGGTCACAGTCATGGACATGGTGATCATGACCACGGTCATGGCAGCCACGAACATGGTCATGAACATCATGGAATAAGTGTTACCACACACCACCACCACCTCCACCACCGTAAAGAAGAGGAGGTAACTACCAGCGATGGTGTTAAGGATGACCATCATCACGCACACGAGGTATCAGTAACTGCACCCTTACTTGAGAGTTGCTGTGACGACGAAAATCAAAAGGTTACCAAGGCACAGAAGAAACAACGAAACATAAACGTACAGGGGGCTTACCTTCACGTACTTGGAGATTCCATCCAAAGCATCGGAGTGATGATCGGTGGGGCAGCCATATGGTATAATTCCGAATACAAGATTCTTGATCTGATATGCACCCTCATTTTCTCTGCAATCGTGCTCTGCACAACAATTCAAATGCTCCGAAACATCCTCGAGGTTCTGATGGAGAGCACACCGCGAGAGATCGACGCAACAAAGCTCGAGAAGGGTCTGTGTGAGATGGACGAGGTAGTTGCAATCCACGAACTGCATATCTGGGCGATAACGGTTGGAAAGGTTTTATTGGCATGCCATGTTATAATAAAGCCAGAGGCAAATGCAGACATGGTATTGGACAAGGTTATAGAGTATATCAGAAGAGAGTACAACATCAGCCATGTCACTATTCAGATAGAGCGCCAGTAG 1260 45.79 MEVHNHDHGHIIEVCGDVQAVGPSIVGSKICGEAPSCGFSDAKNSSKDAKERSASMRKLFIAVVLCIVFMSVEVVGGIKANSLAILTDAAHLLSDVAAFAISLFSLWASGWEATPRQSYGFFRIEILGALVSIQMIWLLAGILVYEAIVRLINGPGEVKGLLMFAVSAFGLVVNIAMALLLGHEHGHAHSHGHSHGHGDHDHGHGSHEHGHEHHGISVTTHHHHLHHRKEEEVTTSDGVKDDHHHAHEVSVTAPLLESCCDDENQKVTKAQKKQRNINVQGAYLHVLGDSIQSIGVMIGGAAIWYNSEYKILDLICTLIFSAIVLCTTIQMLRNILEVLMESTPREIDATKLEKGLCEMDEVVAIHELHIWAITVGKVLLACHVIIKPEANADMVLDKVIEYIRREYNISHVTIQIERQ 419
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 3789688 3794408 + Tan0013209.3 Tan07g0140 757671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan07g0140 419 MobiDBLite consensus disorder prediction 194 215 - -
Tan07g0140 419 MobiDBLite consensus disorder prediction 186 244 - -
Tan07g0140 419 Pfam Cation efflux family 59 340 IPR002524 GO:0006812(InterPro)|GO:0008324(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Tan07g0140 419 SUPERFAMILY Cation efflux protein transmembrane domain-like 53 341 IPR027469 -
Tan07g0140 419 Gene3D Cation efflux protein transmembrane domain 55 339 IPR027469 -
Tan07g0140 419 NCBIfam cation diffusion facilitator family transporter 56 419 IPR002524 GO:0006812(InterPro)|GO:0008324(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Tan07g0140 419 SUPERFAMILY Cation efflux protein cytoplasmic domain-like 346 417 IPR036837 -
Tan07g0140 419 PANTHER CATION EFFLUX PROTEIN/ ZINC TRANSPORTER 27 418 IPR050681 GO:0005385(PANTHER)|GO:0005773(PANTHER)|GO:0005886(PANTHER)|GO:0071577(PANTHER)
Tan07g0140 419 MobiDBLite consensus disorder prediction 225 244 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan07g0140 Tan-Chr7:3789688 Tan07g1301 Tan-Chr7:60465874 7.50E-15 dispersed
Tan07g0139 Tan-Chr7:3787721 Tan07g0140 Tan-Chr7:3789688 9.90E-201 tandem
Tan07g0140 Tan-Chr7:3789688 Tan07g0141 Tan-Chr7:3789946 9.90E-201 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan07g0140 K14689 - csv:101213602 644.039