Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan07g0156 | ATGAATTTTGGGGTGAATCGAGTCCAGAATCAGGATGTGGAGGCAAGGAATAGGGTGGATTTGGAGGAAGCTGGTTCGGGCGCCGTGGAGTTCGACGGTGGAGGAGAAGTGGAGAGGGAACACATGTTTGACAAAGTGGTGACGCCGAGTGATGTCGGGAAATTGAACCGGCTGGTGATTCCAAAGCAACACGCTGAGAGATTTTTTCCATTAGATTCGTCTACCAACGACAAGGGTTTGCTCTTAAACTTCGAAGATCGCAACGGGAAATCATGGCGGTTTCGTTACTCTTACTGGAACAGCAGCCAGAGCTACGTTATGACCAAAGGCTGGAGTCGCTTTGTTAAAGAGAAACGCCTCGACGCCGGTGATATCGTCTCATTTCAACGTGGAGTTGGCGAAATTGGAAGGGATCGTCTTTACATTGACTGGCGCCGCCGTCCTGACCTTCCCATCGACCATCATCACCACCACCACCACCCTGTCACAGTCGGCATCCGACCGAGCATCATCATCCCCACCACCGCCACCGCCACCGCTTGGGGTTCATTAGTGTGGCGACCACTCAGCGCAGCAACAGCAGCTGGATACCACCACCATCCAGCTACCGTAACGCCACGGGACCACACACACTTGTCGCGAATAAACAACAACAGCAACAACAACTTCAACAACGGTAGCAGCAACAACAATGTTAATGTAATGTATGATTGGAATAGAGGGTGCTGTCCGTACGGATATGGGAGTGTTGAAGAATCATCATCAGAGGTGGTGTTTTTTAGGACAGAGGGAAGAAGGGTAGTCCCAAGATTAGGGGATGAATTGGAGATGGAGATGATGGAGGGGAAAAATCAGATGCAGCAAGAGTATTTTAGTAGTGGTGGAAGTGGTGTGGGTGGTGGTTCAATGGTGGTCCAAGGAAATTATGAAGACTTAAAAACAACAACAAGAAATACAAATACAAATTATAATGAAATATTAGAAGATCAAGATACACCAGTGAAGAGATCAAGACTGAGGCTTTTTGGTGTAAACATGGAGATGGATTGTCCAATCTCATCTTCTTCAGATGAATGTGACTTATTATTGTCTTCTTCTTCTAATTCAAACCCCAAAACCACCACTCAATTCCAATTGCCATCTCCTTCAACTCCTCCTCCACATCATCAATCATGA | 1176 | 47.02 | MNFGVNRVQNQDVEARNRVDLEEAGSGAVEFDGGGEVEREHMFDKVVTPSDVGKLNRLVIPKQHAERFFPLDSSTNDKGLLLNFEDRNGKSWRFRYSYWNSSQSYVMTKGWSRFVKEKRLDAGDIVSFQRGVGEIGRDRLYIDWRRRPDLPIDHHHHHHHPVTVGIRPSIIIPTTATATAWGSLVWRPLSAATAAGYHHHPATVTPRDHTHLSRINNNSNNNFNNGSSNNNVNVMYDWNRGCCPYGYGSVEESSSEVVFFRTEGRRVVPRLGDELEMEMMEGKNQMQQEYFSSGGSGVGGGSMVVQGNYEDLKTTTRNTNTNYNEILEDQDTPVKRSRLRLFGVNMEMDCPISSSSDECDLLLSSSSNSNPKTTTQFQLPSPSTPPPHHQS | 391 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 3960967 | 3962249 | - | Tan0014571.1 | Tan07g0156 | 757687 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan07g0156 | 391 | SUPERFAMILY | DNA-binding pseudobarrel domain | 40 | 148 | IPR015300 | - | |
Tan07g0156 | 391 | Pfam | B3 DNA binding domain | 43 | 147 | IPR003340 | GO:0003677(InterPro) | |
Tan07g0156 | 391 | FunFam | B3 domain-containing protein | 36 | 158 | - | - | |
Tan07g0156 | 391 | Gene3D | - | 37 | 160 | IPR015300 | - | |
Tan07g0156 | 391 | MobiDBLite | consensus disorder prediction | 353 | 379 | - | - | |
Tan07g0156 | 391 | SMART | B3_2 | 43 | 148 | IPR003340 | GO:0003677(InterPro) | |
Tan07g0156 | 391 | PANTHER | B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 | 34 | 346 | IPR044800 | GO:0003700(InterPro) | |
Tan07g0156 | 391 | ProSiteProfiles | B3 DNA-binding domain profile. | 43 | 148 | IPR003340 | GO:0003677(InterPro) | |
Tan07g0156 | 391 | MobiDBLite | consensus disorder prediction | 353 | 391 | - | - | |
Tan07g0156 | 391 | CDD | B3_DNA | 41 | 130 | IPR003340 | GO:0003677(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan07g0156 | Tan-Chr7:3960967 | Tan08g1679 | Tan-Chr8:67117841 | 1.00E-37 | dispersed | |
Tan07g0156 | Tan-Chr7:3960967 | Tan06g1845 | Tan-Chr6:44839824 | 7.90E-59 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
27878 | PF02362 | B3 | 8.30E-29 | CL0405 | Tan | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan07g0156 | K09287 | - | csv:101211271 | 392.119 |