Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan07g0156 ATGAATTTTGGGGTGAATCGAGTCCAGAATCAGGATGTGGAGGCAAGGAATAGGGTGGATTTGGAGGAAGCTGGTTCGGGCGCCGTGGAGTTCGACGGTGGAGGAGAAGTGGAGAGGGAACACATGTTTGACAAAGTGGTGACGCCGAGTGATGTCGGGAAATTGAACCGGCTGGTGATTCCAAAGCAACACGCTGAGAGATTTTTTCCATTAGATTCGTCTACCAACGACAAGGGTTTGCTCTTAAACTTCGAAGATCGCAACGGGAAATCATGGCGGTTTCGTTACTCTTACTGGAACAGCAGCCAGAGCTACGTTATGACCAAAGGCTGGAGTCGCTTTGTTAAAGAGAAACGCCTCGACGCCGGTGATATCGTCTCATTTCAACGTGGAGTTGGCGAAATTGGAAGGGATCGTCTTTACATTGACTGGCGCCGCCGTCCTGACCTTCCCATCGACCATCATCACCACCACCACCACCCTGTCACAGTCGGCATCCGACCGAGCATCATCATCCCCACCACCGCCACCGCCACCGCTTGGGGTTCATTAGTGTGGCGACCACTCAGCGCAGCAACAGCAGCTGGATACCACCACCATCCAGCTACCGTAACGCCACGGGACCACACACACTTGTCGCGAATAAACAACAACAGCAACAACAACTTCAACAACGGTAGCAGCAACAACAATGTTAATGTAATGTATGATTGGAATAGAGGGTGCTGTCCGTACGGATATGGGAGTGTTGAAGAATCATCATCAGAGGTGGTGTTTTTTAGGACAGAGGGAAGAAGGGTAGTCCCAAGATTAGGGGATGAATTGGAGATGGAGATGATGGAGGGGAAAAATCAGATGCAGCAAGAGTATTTTAGTAGTGGTGGAAGTGGTGTGGGTGGTGGTTCAATGGTGGTCCAAGGAAATTATGAAGACTTAAAAACAACAACAAGAAATACAAATACAAATTATAATGAAATATTAGAAGATCAAGATACACCAGTGAAGAGATCAAGACTGAGGCTTTTTGGTGTAAACATGGAGATGGATTGTCCAATCTCATCTTCTTCAGATGAATGTGACTTATTATTGTCTTCTTCTTCTAATTCAAACCCCAAAACCACCACTCAATTCCAATTGCCATCTCCTTCAACTCCTCCTCCACATCATCAATCATGA 1176 47.02 MNFGVNRVQNQDVEARNRVDLEEAGSGAVEFDGGGEVEREHMFDKVVTPSDVGKLNRLVIPKQHAERFFPLDSSTNDKGLLLNFEDRNGKSWRFRYSYWNSSQSYVMTKGWSRFVKEKRLDAGDIVSFQRGVGEIGRDRLYIDWRRRPDLPIDHHHHHHHPVTVGIRPSIIIPTTATATAWGSLVWRPLSAATAAGYHHHPATVTPRDHTHLSRINNNSNNNFNNGSSNNNVNVMYDWNRGCCPYGYGSVEESSSEVVFFRTEGRRVVPRLGDELEMEMMEGKNQMQQEYFSSGGSGVGGGSMVVQGNYEDLKTTTRNTNTNYNEILEDQDTPVKRSRLRLFGVNMEMDCPISSSSDECDLLLSSSSNSNPKTTTQFQLPSPSTPPPHHQS 391
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 3960967 3962249 - Tan0014571.1 Tan07g0156 757687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan07g0156 391 SUPERFAMILY DNA-binding pseudobarrel domain 40 148 IPR015300 -
Tan07g0156 391 Pfam B3 DNA binding domain 43 147 IPR003340 GO:0003677(InterPro)
Tan07g0156 391 FunFam B3 domain-containing protein 36 158 - -
Tan07g0156 391 Gene3D - 37 160 IPR015300 -
Tan07g0156 391 MobiDBLite consensus disorder prediction 353 379 - -
Tan07g0156 391 SMART B3_2 43 148 IPR003340 GO:0003677(InterPro)
Tan07g0156 391 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 34 346 IPR044800 GO:0003700(InterPro)
Tan07g0156 391 ProSiteProfiles B3 DNA-binding domain profile. 43 148 IPR003340 GO:0003677(InterPro)
Tan07g0156 391 MobiDBLite consensus disorder prediction 353 391 - -
Tan07g0156 391 CDD B3_DNA 41 130 IPR003340 GO:0003677(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan07g0156 Tan-Chr7:3960967 Tan08g1679 Tan-Chr8:67117841 1.00E-37 dispersed
Tan07g0156 Tan-Chr7:3960967 Tan06g1845 Tan-Chr6:44839824 7.90E-59 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
27878 PF02362 B3 8.30E-29 CL0405 Tan TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan07g0156 K09287 - csv:101211271 392.119