Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan07g0170 ATGGAACCGGCGGGAGGTGGTGGAACGGGATCGGGATCGGGATTGGGGTTACCTCGATCTCAATCGCAGTCTCAATTTCGAGTTTCGCCGCCGGATATCAGCACGCCGCCCTTGACCGTCGACGCCATAAGCGATTCTCAGCAAGTCGAAGCTGCTTCGCCGATTAGTAGCCGACCTCCCGCACCGTCTTCTTTGAATTATGACGAACTCATTCGTCTCTCCGCCGGACAGATGCCGGGCGACGACGATGCGCTCGCCGGAGATGAAGCCGACAGAACCGGCGGCGGTGGCGGCGCCGGTAATCGGTGGCCTCGTCAGGAAACACTAGCGCTGCTTAAAATTAGGTCAGATATGGATTCCGCCTTCCGCGATGCTACACTCAAAGGTCCTCTCTGGGATGAAGTTTCCAGGAAGCTAGCGGAATTGGGTTACAACAGAAGCGCCAAAAAATGCAAAGAGAAATTTGAGAACGTTCAGAAATATTACAAGCGCACAAAAGAAGGACGTGGAGGCCGTCAAGATGGCAAAACCTACAAATTCTTCACACAACTTGAGGCCCTTCACAACGCCAACGCCGCCGCATCTACTCCCACAACCACCACTCAAAACGTGGCGCCTTCTTCTTTCTCAGCGCCGCCCACTGGTTTTGGGATTAGCAACCCAACTCCAATCTCATCCGTCAAAATCTCACCCACCGTCATTTCTTCACAGACCCAAATGGGAATCTTTTCACCTGCTGACCATTTAACCGTCAGGCCGCCGCCCGTGGCCGCCCCTATGGGTGTCAGCTTTTCGTCGAACACCTCGTCTGCATCCACGGAGGACGACGACAATAACGAAGATGAGGAGATGGGGTTTGATGTTGACCTTGAAGGGGAGCCGTCGAGTGTCGCCGGGACCAGCCGGAAGCGGCGGAGAGGGGTGGTTAAGGGAAGTGGGTCGAGAACCCATAAAATGATGATGGAGTTTTTTGAGGGTTTGATGAAGCAAGTGATGCATAAACAGGAGGTTATGCAACAGAAGTTTTTGGAAGCGATTGAGAAGAGGGAACAGGATAGGATGATTAGAGAAGAGACGTGGAAAAGGCAAGAAATGGCTAGATTGAGCCGGGAGCAAGAGAGAATGGCTCAAGAACGGACAATTTCTGCTTCTAGAGATGCTGCTATAATTGGGTTTCTTCAGAAATTCACTGGTCAAACTATTCAATTACCTGTGGTGAATATCTCTTCTTCTTCTGCAGCCCCACAACAGCAACAACAACAATATGATGTGCCTGTGTCTGTAGCAGTGTCTGTGCCTATGCCTGTGGCTATCCCGCCTGTCCCAGTGTCAGTACCGGTGCCACTATCGCCTGTCCCCCCTCCGCCATTGCAACCACAAACAACTCTGCCACAACAGCAAAATCAAAAAACAACCCAGGTTCAGAATCAGCCGCCTTCAAATACAATGCCGCCATTGGATCAGCCAATGCCATATCAGGAAATCAGCCAAGGGGGAGGAGATGGGAGTAGTTCAGAACCCATTTCTTCAAGATGGCCAAAACCGGAAGTTCTAGCGCTGATTAAAATTAGAGGTGGGCTTGAATCGAGGTATCAAGAGACGGGTCCAAAGGGTCCTCTGTGGGAAGAGATTTCAGCTGGAATGCAACGGATGGGTTACAAGAGAAGTGCCAAAAGATGCAAGGAAAAATGGGAAAACATCAATAAATACTTCAAGAAGGTTAAAGAAAGCAACAAAAAACGCCGCGAGGATTCAAAAACCTGCCCCTATTTCGACGAACTCGACGCCCTTTACCGCAAAAAGATCCTCGGCGTTGGCGGTGGTGGTTCTGACGGCGGTGGTAGTGGCAGTAGAAGCTCGTTTAGCGATACGAGCAAATTTGAACAAGACCCCATTAAGAATATGGACATGGAAATGACCCCATCAACAGCTGCAGCAACCCATTCTATCATTATTCCACGGCCTCAATCTCAAACCACACTTGCGGAAGGCTTATCCGCAAGTCTGTTTGGTGAAGGAACTGAAGAACAACCAGCAACATCCACGAAGGTAAACTCGTTAATTCATCAAACGAATCATAATTTCACAACCCCCTTTTGA 2100 50.1 MEPAGGGGTGSGSGLGLPRSQSQSQFRVSPPDISTPPLTVDAISDSQQVEAASPISSRPPAPSSLNYDELIRLSAGQMPGDDDALAGDEADRTGGGGGAGNRWPRQETLALLKIRSDMDSAFRDATLKGPLWDEVSRKLAELGYNRSAKKCKEKFENVQKYYKRTKEGRGGRQDGKTYKFFTQLEALHNANAAASTPTTTTQNVAPSSFSAPPTGFGISNPTPISSVKISPTVISSQTQMGIFSPADHLTVRPPPVAAPMGVSFSSNTSSASTEDDDNNEDEEMGFDVDLEGEPSSVAGTSRKRRRGVVKGSGSRTHKMMMEFFEGLMKQVMHKQEVMQQKFLEAIEKREQDRMIREETWKRQEMARLSREQERMAQERTISASRDAAIIGFLQKFTGQTIQLPVVNISSSSAAPQQQQQQYDVPVSVAVSVPMPVAIPPVPVSVPVPLSPVPPPPLQPQTTLPQQQNQKTTQVQNQPPSNTMPPLDQPMPYQEISQGGGDGSSSEPISSRWPKPEVLALIKIRGGLESRYQETGPKGPLWEEISAGMQRMGYKRSAKRCKEKWENINKYFKKVKESNKKRREDSKTCPYFDELDALYRKKILGVGGGGSDGGGSGSRSSFSDTSKFEQDPIKNMDMEMTPSTAAATHSIIIPRPQSQTTLAEGLSASLFGEGTEEQPATSTKVNSLIHQTNHNFTTPF 699
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 4244448 4248519 - Tan0003818.2 Tan07g0170 757701
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan07g0170 699 CDD GT1 510 575 - -
Tan07g0170 699 MobiDBLite consensus disorder prediction 14 32 - -
Tan07g0170 699 MobiDBLite consensus disorder prediction 274 289 - -
Tan07g0170 699 MobiDBLite consensus disorder prediction 258 314 - -
Tan07g0170 699 Pfam Myb/SANT-like DNA-binding domain 510 597 IPR044822 -
Tan07g0170 699 Pfam Myb/SANT-like DNA-binding domain 101 187 IPR044822 -
Tan07g0170 699 MobiDBLite consensus disorder prediction 613 628 - -
Tan07g0170 699 MobiDBLite consensus disorder prediction 606 629 - -
Tan07g0170 699 MobiDBLite consensus disorder prediction 39 63 - -
Tan07g0170 699 MobiDBLite consensus disorder prediction 1 103 - -
Tan07g0170 699 FunFam Trihelix transcription factor GT-2 512 573 - -
Tan07g0170 699 FunFam Trihelix transcription factor GT-2 103 164 - -
Tan07g0170 699 Gene3D - 103 164 - -
Tan07g0170 699 Gene3D - 512 573 - -
Tan07g0170 699 SMART sant 508 570 IPR001005 -
Tan07g0170 699 SMART sant 99 161 IPR001005 -
Tan07g0170 699 MobiDBLite consensus disorder prediction 452 511 - -
Tan07g0170 699 CDD GT1 101 166 - -
Tan07g0170 699 ProSiteProfiles Myb-like domain profile. 504 568 IPR001005 -
Tan07g0170 699 ProSiteProfiles Myb-like domain profile. 101 159 IPR001005 -
Tan07g0170 699 PANTHER FI21293P1 81 619 - -
Tan07g0170 699 MobiDBLite consensus disorder prediction 462 481 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan07g0170 Tan-Chr7:4244448 Tan07g0890 Tan-Chr7:16316341 3.30E-76 dispersed
Tan07g0169 Tan-Chr7:4244448 Tan07g0170 Tan-Chr7:4244448 0.00E+00 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
27881 PF13837 Myb_DNA-bind_4 3.50E-23 CL0123 Tan TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan07g0170 - - - 0.0