Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan07g0172 ATGGGTTTGCTCCGATTCTTTAGAGTCAAGAGGAAATCGAAAGTTGCTGATAAGAAAACCGTTCTTGATACCAAAATTGACGATGGTTTTGCTGCTGGAACGTTTCGGTGGAGTGAGATCGAGGCATTTACTAAGAATTTCTCCACCCTCGTCGGCTCCGGCGGCTTTAGCAACGTTTTTCTTGCTCGGACGGCGGCCGGCACGGCGGCGGCGGTTAAAATTATGGGCGCTAGTGAGCGGCTCAACCGGATGTTCCGCCAGGAGTTGGACATTCTTCTGCAGCTTCGTCACCGGAATATTGTTAGCTTCACTGGCTATTGCGATGAACGAGATGAAGGAGCTTTAGTATTCGAATATGTACCAAATGGGAACTTACAAGAGAAGCTCCACGGGCGGCCGGCAGCCGCCAAGACGGCGGCAGCGGCGGTTCTTCCATGGAAAATCCGGCTAACTATAGCCTTTCAATTAGCCCAAGCAATCGAATACCTTCATGAAAAATGCAGTCTTCAAATCGTGCACAGCGATATAAAATCATCGAACATATTACTGGACGAACGATTCAATTGCAAACTCTGCGATTTCGGGTCTGCAAAAATGGGATTCTCGTCGGCGGTGGCGAATCCATCGTCGTCGCCGTCGAGTCCCTTCAGAGCGAAGCAATTGATGATGGGATCTCCAGGTTACACAGATCCCCAATACTTACGAACCGGAATCGCCTCAAAGAAGAACGACATTTACAGTTTCGGCGTCGTTCTTCTAGAGCTCATCACCGGAAAAGAGGCCTTCTGTTCAGAAAAGGGTCAAATTCTAACTTCAATTATACCTCCGGCAATTCGCGACGGCGGAGGAATTACAACATCGGCAATGGTGGAGCTAGTGGATCCTCGGCTCGGTGGGGATTTCGACGGCAGAGAAGCGAGAGCGTTGCTCTCAATTGCGGCGGCATGCATATCTCAGCCGCCGACGCCGAGGCCGACAATCGGCGGCGTGCTGCAGATGATGAGGGAGCGGATCGGGGATATTAGCGACGGGGTCTGGCCGGAGCCACGTGGCGGGAAATTGTTGGATAAGAGGAGGTGGTAA 1083 51.52 MGLLRFFRVKRKSKVADKKTVLDTKIDDGFAAGTFRWSEIEAFTKNFSTLVGSGGFSNVFLARTAAGTAAAVKIMGASERLNRMFRQELDILLQLRHRNIVSFTGYCDERDEGALVFEYVPNGNLQEKLHGRPAAAKTAAAAVLPWKIRLTIAFQLAQAIEYLHEKCSLQIVHSDIKSSNILLDERFNCKLCDFGSAKMGFSSAVANPSSSPSSPFRAKQLMMGSPGYTDPQYLRTGIASKKNDIYSFGVVLLELITGKEAFCSEKGQILTSIIPPAIRDGGGITTSAMVELVDPRLGGDFDGREARALLSIAAACISQPPTPRPTIGGVLQMMRERIGDISDGVWPEPRGGKLLDKRRW 360
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 4289783 4292117 + Tan0003987.1 Tan07g0172 757703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan07g0172 360 Pfam Protein kinase domain 49 332 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan07g0172 360 Gene3D Transferase(Phosphotransferase) domain 1 120 342 - -
Tan07g0172 360 SMART serkin_6 45 338 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan07g0172 360 ProSitePatterns Serine/Threonine protein kinases active-site signature. 171 183 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan07g0172 360 ProSiteProfiles Protein kinase domain profile. 45 338 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan07g0172 360 PANTHER OS01G0750732 PROTEIN 32 334 IPR050885 -
Tan07g0172 360 SUPERFAMILY Protein kinase-like (PK-like) 34 334 IPR011009 -
Tan07g0172 360 Gene3D Phosphorylase Kinase; domain 1 8 119 - -
Tan07g0172 360 ProSitePatterns Protein kinases ATP-binding region signature. 51 73 IPR017441 GO:0005524(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan07g0172 Tan-Chr7:4289783 Tan01g0694 Tan-Chr1:6678109 2.90E-47 dispersed
Tan07g0172 Tan-Chr7:4289783 Tan09g0419 Tan-Chr9:40550170 3.90E-44 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67830 PF00069 Pkinase 8.60E-41 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan07g0172 - - - 0.0