Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan07g0173 ATGTCCCAATTCGTTGACACTCCAAAGAGGAGCCAATCTCACATCTGTTTCACTCACTCTCATACTCTTCATGTCTCTCTCGCTCGAAAGTTGGGAGCAGAATTTGTGGGCACGTTCATCCTTATATTTGCTGCAACCGCCGCACCCATCGTCAACCAAAAGTACAACGCCGCCGTGTCTCTGATCGGAAACGCCGTAAGCGCCGGCCTAGCAGTGATGATCGTAATTATGTCGACGGGCCACATCTCCGGCGCCCACCTAAACCCATCGCTCACCATTGCCTTGGCCGCCGTCCGCCACTTCCCTTGGGTCCAAGTCCCGGCCTACATCGCCGCCCAAGTCTCCGCCTCCATCTGCGCCTCCTTCGCTCTCAAAGGTGTTTTTCACCCTTTCATGTCCGGCGGCGTCACCGTCCCCTCCGTCGCCACCGGCCAGGCCTTCGCTCTTGAATTTCTCATCACCTTCAATCTCCTGTTTGTCGTCACTGCTGTCGCTACTGATGCTCGCGCTGTCGGAGAGTTGGCCGGAATTGCAGTTGGAGCTACAGTGATGCTCAACATTCTTATTGCCGGAGCATCCACCGGTGGTTCGATGAACCCAGTGCGGACTCTGGGTCCCGCCGTCGCCGCCGGAAATTACAGAGAACTGTGGGTGTATATGGTGGCTCCTACTCTTGGGGCTATTGTCGGCGCCGGAACCTACTTCGCCGTGAAGCTCAAAGATGACGAACTGAATGATTCCTCGCAGGTGAGGAGCTTCCGTCGATGA 768 56.12 MSQFVDTPKRSQSHICFTHSHTLHVSLARKLGAEFVGTFILIFAATAAPIVNQKYNAAVSLIGNAVSAGLAVMIVIMSTGHISGAHLNPSLTIALAAVRHFPWVQVPAYIAAQVSASICASFALKGVFHPFMSGGVTVPSVATGQAFALEFLITFNLLFVVTAVATDARAVGELAGIAVGATVMLNILIAGASTGGSMNPVRTLGPAVAAGNYRELWVYMVAPTLGAIVGAGTYFAVKLKDDELNDSSQVRSFRR 255
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 4295613 4309914 - Tan0021050.1 Tan07g0173 757704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan07g0173 255 Pfam Major intrinsic protein 24 234 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Tan07g0173 255 PANTHER AQUAPORIN NIP2-1 14 242 IPR034294 -
Tan07g0173 255 Gene3D Glycerol uptake facilitator protein. 2 250 IPR023271 -
Tan07g0173 255 FunFam Aquaporin NIP2-1 17 249 - -
Tan07g0173 255 ProSitePatterns MIP family signature. 86 94 IPR022357 -
Tan07g0173 255 PRINTS Major intrinsic protein family signature 68 92 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Tan07g0173 255 PRINTS Major intrinsic protein family signature 105 124 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Tan07g0173 255 PRINTS Major intrinsic protein family signature 180 202 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Tan07g0173 255 PRINTS Major intrinsic protein family signature 149 167 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Tan07g0173 255 PRINTS Major intrinsic protein family signature 217 237 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Tan07g0173 255 PRINTS Major intrinsic protein family signature 29 48 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Tan07g0173 255 SUPERFAMILY Aquaporin-like 22 240 IPR023271 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan07g0173 Tan-Chr7:4295613 Tan07g1205 Tan-Chr7:47124639 1.10E-53 dispersed
Tan07g0173 Tan-Chr7:4295613 Tan07g0174 Tan-Chr7:4313955 2.00E-111 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan07g0173 K09874 - csv:101212651 406.757