Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan07g0187 | ATGATTGAGTTCTGTTTTCTTGATACAGATGGCAATTCAAGCTTAATTACATCCTACTCTCATTTCCCTTCTCCTTCCCCTTCCCTACCATTACAACGATTTCAAGCTCTTTCAACCATCAATCAATCTCTTCTTACAACGAAAGCTAGCCCCATTATACCCAACCATTCTAGATGTCAATCCATTGATATTGAGGAGAATGTGGATGGTGTTCGTTCTTCTTCCTTCGTGTCAGATTGCGCACAAACATTGAGTCGGGCCTCTAGTTGTAAAAGCTTGCCAACAGATAACCAGTCTTGGGTATCTGATGAAGCTTCATCCTCAGGCGCATTCAATGATTATTCTTCATGTGAAAGTCAGGCGGATGTCAACTTTGAGCTTGAAAAGTTGAGAATCGAACTAAGACATGCAAGAGGAATGTATGCAATTGCTCAACGAGAGACGATCGATGCCTCTCGAAAGCTGAAGCATCTAGATAAACAACGATTAGAGGAAGCTAGGAAGCTCGAAGAGATCAACAGTAAAGAGGTGGCTTCCAAAGAATTTGCTAGGGAAGAGAGAGCGAAGCTTGAAGCTTTGAGAAGAGAAGCAAAGTATGTAAAAGAACGCGCCGAAAGAGAGGGCATCTATAGGAAGGAAGCAGAGACGAAAGCTCTTCAAGATGCCAAAGAGAAGGGAAAGCATGAGAATGCTCTTCAAGGACCTTTGCAACAATATCAACATTTTCAGTGGGAAGATATTGTTTCTGCCACATCATCGTTCTCTGAGGATCTTAAGATTGGAATGGGAGCACATGGAACAGTCTATAAGTGCAGTTTGCATCATACAACTGTAGCAGTGAAGGTTCTTCACTCTAGAGATGGTCACAAAAAGATGCAATTTCTTCAGGAGCTTGAAATCTTGAGCAAAATTCACCATCCCCATCTACTACTACTCCTCGGAGCGTGTCCAGATAAGAATTGCCTGGTTTATGAGTACATGGAAAATGGTAGCTTGGAGGATAGGTTGTACCGCAGAGGCGATACACCTGCAATCCCATGGTATGAGAGGTATAGAATTGCTTGGGAAATAGCCTCTGCTCTTGTCTTTCTTCACAGCTCAAAGCCAGAACCAATAATCCACCGGGATCTTAAGCCAGCAAACATCTTACTTGACCAGAACCTCGTGAGCAAAATCGGCGATGTCAGTCTTTCTACCGTGTTTAGTTCAGACCCTTTAATGTCTACTGCATTCAAGGACAGTGGACCAGTTGGAACTCTCTGTTACATAGATCCCGAGTATCAACGAACTGGATTAATCTCACCTAAGTCTGATGTGTATGCTTTTGGAATGGTGATCTTGCAGTTACTAACTGCAAAACCAGCAGTAGCATTAACCCATGTGGTGGAAACAGCCATTGATAACCACACTTTAATAAGGGTTCTTGATATAGAGGCTGGACATTGGCCCGTCGAAGAGACGTATGAATTGGCGAGATTAGGACTTCGCTGTGCAGAGCTGCAACGTAAAGATAGGCCCAACTTAAAGGATCATGTACTTCCCTTGTTACTGACACTGAAAAAGGTTGCTGACGAGGCTCGCAATTCGGCCTCCAGAGTTCCAGCTGCAATTCCTAATCATTTCATCTGTCCAATTCGTCAGGACGTGATGAATGACCCTTGTGTTGCGGCGGATGGATACACATACGATCGTCGGGCGATAGAGAAGTGGCTTCAAGAGAACGACATCTCACCAATGACAAAGTTGCGACTGCCAGATAAGAATTTAATACCAAACTATAGTCTTCTCTCTGCAATTGTTGAGTGGAACTCCAGAAAAAACTAA | 1824 | 43.42 | MIEFCFLDTDGNSSLITSYSHFPSPSPSLPLQRFQALSTINQSLLTTKASPIIPNHSRCQSIDIEENVDGVRSSSFVSDCAQTLSRASSCKSLPTDNQSWVSDEASSSGAFNDYSSCESQADVNFELEKLRIELRHARGMYAIAQRETIDASRKLKHLDKQRLEEARKLEEINSKEVASKEFAREERAKLEALRREAKYVKERAEREGIYRKEAETKALQDAKEKGKHENALQGPLQQYQHFQWEDIVSATSSFSEDLKIGMGAHGTVYKCSLHHTTVAVKVLHSRDGHKKMQFLQELEILSKIHHPHLLLLLGACPDKNCLVYEYMENGSLEDRLYRRGDTPAIPWYERYRIAWEIASALVFLHSSKPEPIIHRDLKPANILLDQNLVSKIGDVSLSTVFSSDPLMSTAFKDSGPVGTLCYIDPEYQRTGLISPKSDVYAFGMVILQLLTAKPAVALTHVVETAIDNHTLIRVLDIEAGHWPVEETYELARLGLRCAELQRKDRPNLKDHVLPLLLTLKKVADEARNSASRVPAAIPNHFICPIRQDVMNDPCVAADGYTYDRRAIEKWLQENDISPMTKLRLPDKNLIPNYSLLSAIVEWNSRKN | 607 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 4452608 | 4457167 | + | Tan0019991.1 | Tan07g0187 | 757718 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan07g0187 | 607 | Coils | Coil | 127 | 147 | - | - | |
Tan07g0187 | 607 | SUPERFAMILY | RING/U-box | 525 | 605 | - | - | |
Tan07g0187 | 607 | Coils | Coil | 183 | 207 | - | - | |
Tan07g0187 | 607 | CDD | RING-Ubox_WDSUB1-like | 538 | 592 | - | - | |
Tan07g0187 | 607 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 372 | 384 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Tan07g0187 | 607 | Gene3D | Phosphorylase Kinase; domain 1 | 222 | 326 | - | - | |
Tan07g0187 | 607 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 536 | 607 | IPR013083 | - | |
Tan07g0187 | 607 | SUPERFAMILY | Protein kinase-like (PK-like) | 235 | 510 | IPR011009 | - | |
Tan07g0187 | 607 | SMART | Ubox_2 | 540 | 602 | IPR003613 | GO:0004842(InterPro)|GO:0016567(InterPro) | |
Tan07g0187 | 607 | ProSiteProfiles | Protein kinase domain profile. | 254 | 516 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Tan07g0187 | 607 | Pfam | U-box domain | 537 | 606 | IPR003613 | GO:0004842(InterPro)|GO:0016567(InterPro) | |
Tan07g0187 | 607 | Gene3D | Transferase(Phosphotransferase) domain 1 | 327 | 535 | - | - | |
Tan07g0187 | 607 | Pfam | Protein tyrosine and serine/threonine kinase | 259 | 510 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Tan07g0187 | 607 | SMART | serkin_6 | 254 | 516 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Tan07g0187 | 607 | Coils | Coil | 155 | 175 | - | - | |
Tan07g0187 | 607 | ProSiteProfiles | U-box domain profile. | 536 | 607 | IPR003613 | GO:0004842(InterPro)|GO:0016567(InterPro) | |
Tan07g0187 | 607 | ProSitePatterns | Protein kinases ATP-binding region signature. | 260 | 281 | IPR017441 | GO:0005524(InterPro) | |
Tan07g0187 | 607 | PANTHER | OS02G0152300 PROTEIN | 72 | 599 | IPR051348 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan07g0187 | Tan-Chr7:4452608 | Tan08g0050 | Tan-Chr8:535292 | 2.70E-90 | dispersed | |
Tan07g0187 | Tan-Chr7:4452608 | Tan08g0049 | Tan-Chr8:535292 | 1.50E-109 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
67831 | PF07714 | PK_Tyr_Ser-Thr | 3.20E-39 | CL0016 | Tan | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan07g0187 | - | - | - | 0.0 |