Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan07g0188 ATGCTCAAATTAATTCTTCCAGTCGTTTCTTCGGCCACCATTTTTGTTCTTCTCCTAATTTCCATCTTCTTTTTCCGCCATAAGCTCTCAAAAACAGACATCGAAAAGCCGCCGCCGGAGAAGAACAAGAAAAAAGAAGACACGGCGGCGGCAGCGGTGAAGGAGGAGCTGACGACTTTCGCGGGCGGTGAGGATTTGACGATCGACGAGATTCTAGAAGCTCCCGGGGAAGTGATCGGCAAATCCCACTATGGAACTCTGTACATGGCTTCGTTACAGAGCACCCAAAGGACTAGACTACTCCGATTCCTCCGGCCGGCCGCCGTGGAGGATTCCGGCGGGGACGGCGTCGCTCGGTTTCTGGGTTCGATTCGGCACCGGAATTTGGTGCCGATGCTGGGATTTTACGCCGGCGGGAGAGGCGAGAAGCTTTTGGTTCATCCGTTCTATGGTAGAGGGAATCTGGCGGAGTTCATTCGAGTAGGAGAATTAGAATCAAAAAATTGGGAGATCATTTACAAAATCTCCCTCGGAATCGCTAAAGCCCTAGATCATCTTCACCACGGATTACCAAAACCAGTACCGCACGGCAATCTCAAATCCAAGAACATTCTTCTCGATCCAAATTTCGAGCCGCACGTCTCCGATTTCGGCCTCCATCTCCTCCTCAACGCCGCCGCAACTCAAGAAATGCTCCAGGTTTCCGCCGCCTCCGGTTACAAGGCGCCGGAGCTGGTGAATATGACCGACGCCGACGAACGGACTGACGTCTACAGCTACGGCAAGATCTTACTCGAGTTGCTCACCACCAAAGAGCCGATGAATCGAAATGAGGTTGCTAGCAGTGGAGACGGCGGCGATTGCGGTGTTTCTGAAGAGCGGCATCTCCAATGCCTTTTTCAGATCGGCGAGGCTTGTTGTTCTTCTTCCTCGGTTGTTCGGCCGGATTTCAAGGAATTGATCTCGAAGATTGAAGAGATCGGAAGGATTGAGATGGATTGA 1002 51.9 MLKLILPVVSSATIFVLLLISIFFFRHKLSKTDIEKPPPEKNKKKEDTAAAAVKEELTTFAGGEDLTIDEILEAPGEVIGKSHYGTLYMASLQSTQRTRLLRFLRPAAVEDSGGDGVARFLGSIRHRNLVPMLGFYAGGRGEKLLVHPFYGRGNLAEFIRVGELESKNWEIIYKISLGIAKALDHLHHGLPKPVPHGNLKSKNILLDPNFEPHVSDFGLHLLLNAAATQEMLQVSAASGYKAPELVNMTDADERTDVYSYGKILLELLTTKEPMNRNEVASSGDGGDCGVSEERHLQCLFQIGEACCSSSSVVRPDFKELISKIEEIGRIEMD 333
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 4460464 4464479 - Tan0022295.1 Tan07g0188 757719
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan07g0188 333 SUPERFAMILY Protein kinase-like (PK-like) 76 325 IPR011009 -
Tan07g0188 333 ProSiteProfiles Protein kinase domain profile. 73 333 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan07g0188 333 Pfam Protein tyrosine and serine/threonine kinase 77 323 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan07g0188 333 Gene3D Transferase(Phosphotransferase) domain 1 66 333 - -
Tan07g0188 333 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 9 328 IPR052451 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g0430 Tan-Chr1:3925902 Tan07g0188 Tan-Chr7:4460464 6.20E-87 dispersed
Tan07g0188 Tan-Chr7:4460464 Tan08g0198 Tan-Chr8:1771376 1.20E-31 dispersed
Tan07g0188 Tan-Chr7:4460464 Tan09g1335 Tan-Chr9:65636570 6.30E-33 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67832 PF07714 PK_Tyr_Ser-Thr 3.20E-24 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan07g0188 - - - 0.0