Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan07g0226 ATGTTCTTCTGCATAATGGCCCCTACTTCCCTCGCTTCCCGCTTCCAACAATCCGTCACCCCGACCGCCCTCCGATCCTACGCCGCCGAGTTCATCTCCACCTTCTTCTACGTCTTCTCTGTCGTTGGATCATCTATGGCGTCCCAGAAGTTGATGTCGGGCGTTGCTGCGACAGACCCGTCAAGTCTTCTGCTGGCTGCTGTCGCCAATGCCTTTGCTTTAGCCTCGGCGGTTTACATCGCCGCCAACATCTCCGGTGGCCATGTCAACCCCGCGGTGACGTTTGGCATGGCGGTCGGCGGCCATGTCAGTGTTCCCACTGCTCTTTTCTACTGGTTTGCTCAAATGCTTGCCTCCGTCATGGCCTGCATTGTTCTAAGAGCCACCATTGTTGGACAGCCCGTTCCAAACTATGTCATTGCTGAGGAGATGACTGGCTTTGGAGCGTCGGTAGTGGAAGGCATATTGACGTTCGCTCTAGTGTATACTGTTTTCGCTGCTAGCGACCCTAGAAGAGGTCCATGCAATGCGATCGGCGCCATGATGGTCGGGCTGATTGCTGGGGCCAATGTGCTGGCTGCCGGGCCGTTCTCGGGTGGGTCGGTGAACCCGGCGTGTGCGTTCGGAGCGGCGATTGTCGCCGGGAGTTTCAAGAACCAGGCAGTGTATTGGGTTGGGCCATTGATAGGGGCGGCTCTTGCCGGAATTGTTCATGACAATGTGCTTTTTCCGGCTGAAAATGTAGATTCATTCAGAGGGGTTCCTGAGGCTGTTGTGGTGTAA 783 55.94 MFFCIMAPTSLASRFQQSVTPTALRSYAAEFISTFFYVFSVVGSSMASQKLMSGVAATDPSSLLLAAVANAFALASAVYIAANISGGHVNPAVTFGMAVGGHVSVPTALFYWFAQMLASVMACIVLRATIVGQPVPNYVIAEEMTGFGASVVEGILTFALVYTVFAASDPRRGPCNAIGAMMVGLIAGANVLAAGPFSGGSVNPACAFGAAIVAGSFKNQAVYWVGPLIGAALAGIVHDNVLFPAENVDSFRGVPEAVVV 260
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 4883317 4884654 + Tan0004755.1 Tan07g0226 757757
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan07g0226 260 FunFam Probable aquaporin TIP5-1 9 250 - -
Tan07g0226 260 Pfam Major intrinsic protein 20 238 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Tan07g0226 260 PRINTS Major intrinsic protein family signature 70 94 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Tan07g0226 260 PRINTS Major intrinsic protein family signature 107 126 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Tan07g0226 260 PRINTS Major intrinsic protein family signature 152 170 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Tan07g0226 260 PRINTS Major intrinsic protein family signature 221 241 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Tan07g0226 260 PRINTS Major intrinsic protein family signature 184 206 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Tan07g0226 260 PRINTS Major intrinsic protein family signature 25 44 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Tan07g0226 260 Gene3D Glycerol uptake facilitator protein. 10 251 IPR023271 -
Tan07g0226 260 PANTHER AQUAPORIN-8 15 243 IPR034294 GO:0006833(PANTHER)|GO:0015250(PANTHER)|GO:0016020(PANTHER)
Tan07g0226 260 ProSitePatterns MIP family signature. 88 96 IPR022357 -
Tan07g0226 260 SUPERFAMILY Aquaporin-like 18 247 IPR023271 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan07g0226 Tan-Chr7:4883317 Tan07g1804 Tan-Chr7:69590827 2.70E-55 dispersed
Tan07g0226 Tan-Chr7:4883317 Tan06g0273 Tan-Chr6:2170720 1.10E-53 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan07g0226 K09873 - csv:101214078 446.047