Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan07g0256 | ATGTCTTCCACTCCCCTTCTCTCTCTCCCTTTCACTCTCAAGCCCTCTCACTTCCCCAATTCCTCCCTCTCGCCGCTCCGCCGATCATCTTCCTTCGCGCCATTTCGGACAGTAGCAGTTCACAGGGGTTTTAAGAGTACCAGTTCTACTTTCGCCTATGTCACCGGCCCTGCGTCCGACCCTAATGTCAGCGAGTCCGACCCTAAGCTCGACGACGACTCTGATTCCCAGGTTCCGGTTCTTGGCGTCTTGAATTCGGGGCTCATCTGGAGGCTTTTAACGAAGCACAAGCTGCGGCTTCTGGTTTCTTCGCTTACTCTTGTTTGCTGCACCACTTGCACTCTTTCCATGCCCTTTTTCTCTGGTAGATTTTTTGAGGTACTTATAGGTGCAAAACCTGGGTCTTTATGGAGGCTGCTGAGTACGGTTGGAATTTTATATGCATTGGAGCCAATATTGACGGTTTTGTTTGTCACAAACATGAACTTCATGTGGGAGAAGGTTATGTCAAGATTAAGAGCCCAGATTTTTGGAAGGTTGCTGATTCAGAAGGTGGAATTTTTTGACAGATACAAGGTTGGTGAAATTACCGGATTGTTAACTTCTGACTTGGGCTCTCTTAAGGATGTGGTGAGTGAGAATGTTTCAAGGGACCGTGGATTCAGAGCGTTCTCTGAGGTGATTGGAACAATATGTATACTATTTACATTGTCCCCTCAGCTTGCACCCGTTCTTGGTCTGCTGATGCTTTCTGTATCTTTCTCCGTTGCTGTATACAAGCGTTCAACTATTCCTGTATTTAAAGCTCATGGATTAGCTCAAGCATCCATGGCTGATTGTGCAACAGAGACATTCTCTGCTATTCGTACTGTGAGATCCTTTGGTGGTGAAAAGCGTCAAATGTTCACTTTTGGTCGCCAAGTTATTGCATATGAGGGTAGTGGCATATCACTTGGGACTTTTAAATCTCTGAATGAATCTTTAACCAGAGTTGCTGTTTACATTTCGCTTATGACATTATATTGGCTTGGAGGAGACAAAGTGAAAGCGGGTGAACTTTCTGTTGGAACCATGGCTTCTTTTATTGGATATACTTTCACGTTAACATTTGCTGTTCAAGGATTAGTAAATACATTTGGAGATCTCCGCCGAACTTTTGCTGCTGTTGAAAGAATTAATTCTGTTTTAAATGAAGAGGTTGATGAAGCCCTTGCATACGGGTTAGAAAAAGAGATGCAGCAGAAAGAGTTTAGATATAAGTTGTTATTCTCCGGCGATACTGATGAAAATAGTCGAGTGAAAACACAGTACATGGCAGCCCTAAAATCTTCTAGCAACGTTATCAATCTTGCTTGGTCTGGTGATATTTGTCTTGAAGATGTGCGCTTTTCTTATCCTTTGAGACCTGACGTTGACATTCTTAGTGGTTTGAATTTAACCCTTAAATGTGGAACCGTAACGGCATTAGTGGGCCCTAGTGGAGCAGGAAAGAGTACAATAGTACAGCTGTTGGCACGTTTTTATGAGCCAACGCAAGGGCAGATAAAAGTTTCTGGTGAAGATATTCGAGCATTTGATAAAAGGGAATGGGCTCGGGCCGTTTCAATAGTGAATCAAGAACCCGTCCTTTTTTCGGTGTCTGTTGGAGAGAATATTGCATATGGACTTCCAGATGATAATGTAACAAAGGATGAGGTGATAAAGGCAGCCAAAGCTGCAAACGCTCACGACTTCATTATTTCACTTCCTCAGGGCTATGACACGCCAGTCGGTGAACGTGGAGGCCTTCTAAGCGGTGGCCAGCGACAGAGAATTGCAATTGCAAGAGCTTTGCTTAAGAATGCACCAATCCTAATACTTGATGAGGCGACCAGTGCACTGGATGCGGTTAGTGAGCGACTGGTCCAGGATGCTCTGAACCATCTAATGAAGGGCAGGACAACATTGGTGATCGCACATCGGTTGAGTACGGTTCAAAATGCTCATCAAATTGCATTTTGTTCTGATGGAAGAATTGTAGAGCTGGGAACTCATTTGGAACTACTGGCTCAAAAAGGTCAGTATGCTTCATTAGTTGGCACACAAAGGCTGGCATTTGAGTGA | 2103 | 44.22 | MSSTPLLSLPFTLKPSHFPNSSLSPLRRSSSFAPFRTVAVHRGFKSTSSTFAYVTGPASDPNVSESDPKLDDDSDSQVPVLGVLNSGLIWRLLTKHKLRLLVSSLTLVCCTTCTLSMPFFSGRFFEVLIGAKPGSLWRLLSTVGILYALEPILTVLFVTNMNFMWEKVMSRLRAQIFGRLLIQKVEFFDRYKVGEITGLLTSDLGSLKDVVSENVSRDRGFRAFSEVIGTICILFTLSPQLAPVLGLLMLSVSFSVAVYKRSTIPVFKAHGLAQASMADCATETFSAIRTVRSFGGEKRQMFTFGRQVIAYEGSGISLGTFKSLNESLTRVAVYISLMTLYWLGGDKVKAGELSVGTMASFIGYTFTLTFAVQGLVNTFGDLRRTFAAVERINSVLNEEVDEALAYGLEKEMQQKEFRYKLLFSGDTDENSRVKTQYMAALKSSSNVINLAWSGDICLEDVRFSYPLRPDVDILSGLNLTLKCGTVTALVGPSGAGKSTIVQLLARFYEPTQGQIKVSGEDIRAFDKREWARAVSIVNQEPVLFSVSVGENIAYGLPDDNVTKDEVIKAAKAANAHDFIISLPQGYDTPVGERGGLLSGGQRQRIAIARALLKNAPILILDEATSALDAVSERLVQDALNHLMKGRTTLVIAHRLSTVQNAHQIAFCSDGRIVELGTHLELLAQKGQYASLVGTQRLAFE | 700 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 5530315 | 5537742 | + | Tan0006684.1 | Tan07g0256 | 757787 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan07g0256 | 700 | PANTHER | ATP-DEPENDENT PERMEASE MDL1, MITOCHONDRIAL | 86 | 695 | IPR039421 | GO:0005743(PANTHER)|GO:0015421(PANTHER)|GO:0090374(PANTHER) | |
Tan07g0256 | 700 | Gene3D | ABC transporter type 1, transmembrane domain | 87 | 402 | IPR036640 | GO:0005524(InterPro)|GO:0016020(InterPro) | |
Tan07g0256 | 700 | Pfam | ABC transporter transmembrane region | 101 | 371 | IPR011527 | GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)|GO:0140359(InterPro) | |
Tan07g0256 | 700 | Gene3D | - | 454 | 697 | IPR027417 | - | |
Tan07g0256 | 700 | FunFam | ATP-binding cassette sub-family B member 8, mitochondrial | 454 | 698 | - | - | |
Tan07g0256 | 700 | CDD | ABC_6TM_TAP_ABCB8_10_like | 105 | 392 | - | - | |
Tan07g0256 | 700 | Pfam | ABC transporter | 474 | 625 | IPR003439 | GO:0005524(InterPro)|GO:0016887(InterPro) | |
Tan07g0256 | 700 | ProSiteProfiles | ABC transporter integral membrane type-1 fused domain profile. | 101 | 384 | IPR011527 | GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)|GO:0140359(InterPro) | |
Tan07g0256 | 700 | ProSitePatterns | ABC transporters family signature. | 597 | 611 | IPR017871 | GO:0005524(InterPro)|GO:0016887(InterPro) | |
Tan07g0256 | 700 | SMART | AAA_5 | 483 | 677 | IPR003593 | GO:0016887(InterPro) | |
Tan07g0256 | 700 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 456 | 694 | IPR003439 | GO:0005524(InterPro)|GO:0016887(InterPro) | |
Tan07g0256 | 700 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 447 | 695 | IPR027417 | - | |
Tan07g0256 | 700 | CDD | ABC_MTABC3_MDL1_MDL2 | 456 | 695 | - | - | |
Tan07g0256 | 700 | SUPERFAMILY | ABC transporter transmembrane region | 89 | 401 | IPR036640 | GO:0005524(InterPro)|GO:0016020(InterPro) | |
Tan07g0256 | 700 | MobiDBLite | consensus disorder prediction | 56 | 75 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan07g0256 | Tan-Chr7:5530315 | Tan11g0522 | Tan-Chr11:4464064 | 6.50E-72 | dispersed | |
Tan07g0256 | Tan-Chr7:5530315 | Tan08g1860 | Tan-Chr8:70858074 | 6.50E-72 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan07g0256 | K05657 | - | csv:101211598 | 1211.05 |