Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan07g0294 ATGGATTTTTCCGATACTTGCTCTGCCGCCGCCGCCCGCTCCAATTTCTCCGATGAGGAGGTTCTCTTGGCTTCCCGATACCCCAAGAAGAGGGCCGGTAGAAAGAAATTCAAGGAAACTCGCCACCCCATCTACCGCGGTGTCCGCCGCCGCGACTCCGGCAAGTGGGTCTGCGAGGTCCGGGAGCCCAATAAGAAGTCTAGGATTTGGCTCGGTACTTTCCCCACCGCCGAGATGGCTGCCCGGGCTCATGATGTCGCCGCCATCGCCCTCCGCGGCCGCTCCGCCTGTCTCAATTTCGCCGACTCCGCTTCCACTCTCCCGCTTCCGCCCACTGCCGAGCCTAAGGATATTCAGAAGGCCGCCGCTGAGGCTGCAGAGGCCTTCCGCCCCCCGGATCAGACTCCGGCGGCGGCCGACAAGGACGAGATGTTTTATTTGGATGAGGAAGCGGTGTTTGGGATGCCCGGATTGCTGGCGGACATGGCGGAGGCAATGCTGTTGCCGCCGCCGAACTGTGTCGGGAACGACGACGACGACTTTGGGGCTAATTCGATGGACTTCGATGCCGACATGTCGTTATGGAGTTACTCGATTTGA 600 60.67 MDFSDTCSAAAARSNFSDEEVLLASRYPKKRAGRKKFKETRHPIYRGVRRRDSGKWVCEVREPNKKSRIWLGTFPTAEMAARAHDVAAIALRGRSACLNFADSASTLPLPPTAEPKDIQKAAAEAAEAFRPPDQTPAAADKDEMFYLDEEAVFGMPGLLADMAEAMLLPPPNCVGNDDDDFGANSMDFDADMSLWSYSI 199
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 6023525 6025075 + Tan0004584.1 Tan07g0294 757825
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan07g0294 199 ProSiteProfiles AP2/ERF domain profile. 44 101 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan07g0294 199 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D 3 197 IPR045277 GO:0003700(InterPro)
Tan07g0294 199 Pfam AP2 domain 44 93 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan07g0294 199 FunFam Ethylene-responsive transcription factor 2 43 102 - -
Tan07g0294 199 PRINTS Ethylene responsive element binding protein signature 67 83 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan07g0294 199 PRINTS Ethylene responsive element binding protein signature 45 56 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan07g0294 199 CDD AP2 43 103 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan07g0294 199 SMART rav1_2 44 107 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan07g0294 199 SUPERFAMILY DNA-binding domain 44 103 IPR016177 GO:0003677(InterPro)
Tan07g0294 199 Gene3D AP2/ERF domain 44 102 IPR036955 GO:0003700(InterPro)|GO:0006355(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g0296 Tan-Chr1:2531412 Tan07g0294 Tan-Chr7:6023525 7.30E-67 dispersed
Tan07g0294 Tan-Chr7:6023525 Tan07g1705 Tan-Chr7:68415741 9.00E-51 dispersed
Tan07g0294 Tan-Chr7:6023525 Tan01g0295 Tan-Chr1:2506650 2.20E-33 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
27886 PF00847 AP2 4.30E-15 CL0081 Tan TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan07g0294 - - - 0.0