Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan07g0303 ATGAAGCTCATCCCCTTCCTTCCATGGCCGAACCTCCACATGGCCCTCCTTCTCTTCTTCTTCTTCTTTGCTTCTTCACTCCTTTACTCTTCCCCTGCTTCTTCACTTCCCCACGATGAAGGACGAGCGCTAATGTCGATCAAGGCCTCGTTTAGCAATGTAGCTAATGTGTTGCTCGACTGGGATGATGATCATAACACCGATTTCTGTTCGTGGCGTGGGGTTTTCTGCGATAATGTTAGCCTTTCAGTTGCTGCTCTGAACTTGTCCAACTTGAATCTGGGTGGTGAGATTTCACCAGCCATTGGAGATTTGAGAAATTTACAGTCAATTGACTTTCAAGGGAATAAACTGACCGGCCAAATCCCTGATGAGATTGGTAACTGTGGTCTTCTTGTCCATTTGGACTTGTCTGATAATCTGCTTTACGGAGACATCCCCTTCACCATATCGAAGCTAAAGCAGCTCGAGTTCTTAAATCTGAAGAATAATCAGTTGACCGGGCCGATCCCTTCGACTCTTACTCAGATTCCTAATCTTAAAACTCTTGATCTTGCACGAAACCAGCTTACTGGAGAGATACCTAGACTAATCTATTGGAATGAAGTACTGCAATATCTTGGGTTGCGAGGGAACTTTTTGACAGGGTCTTTATCCTCCGATATGTGTCAGTTAACTGGCTTGTGGTACTTCGATGTAAGGGGCAACAATCTGACTGGCGTGATACCGGATAGCATAGGGAACTGTACAAGTTTTGAAATTCTGGATATATCCTACAACCAGATCTCAGGGGAGATTCCTTACAACATTGGATTTCTTCAAGTAGCCACGTTATCATTACAGGGAAATAGGTTGACTGGTAAGATTCCCGATGTCATTGGATTGATGCAGGCCCTAGCTGTCCTGGATTTGAGTGAGAATGAGCTTGAAGGGCCAATTCCGCCAATACTTGGCAACTTGTCCTACACAGGAAAATTGTACCTACACGGAAACAAGTTGACTGGGCCAATTCCTCCCGAGCTGGGCAATATGTCAAAGCTTAGCTACTTGCAACTAAATGATAACCAGCTGGTTGGCACAATTCCTTCTGAACTTGGAAAATTGGATCAGTTGTTCGAATTGAATCTTGCTAGTAATTACCTTGAAGGACCCATTCCTCACAACATTAGCTCTTGCACTGCACTGAATCAATTCAATGTGCATGGAAACCGTCTTAATGGATCTATTGCTTTGGGTTTCCAAGAACTGGAGAGCTTAACCTATTTGAATCTTTCAGCAAACAACTTCAAAGGCAGGATTCCTGTTGAGCTGGGACGCATAATTAACCTCGATACCTTGGATCTATCATGCAATTACTTCTCGGGTCCTGTTCCTGCTTCTATTGGTGATTTGGAGCACCTTCTTAGCCTCAATTTAAGCGATAATCAACTTGTTGGGCCAATACCAGCTGAATTTGGGAATCTTCGGAGCGTACAGATTATTGATATGTCATTCAACAACTTCTCCGGTAGCATACCCATGGAGTTGGGTCAATTGCAAAATATTATGTCCCTAATTTTGAACAACAACTATTTGCAAGGAAAGATACCCGATCAGTTGACAAATTGTTTTAGTCTTTCAAATTTGAACTTGTCATACAACAACTTATCTGGCATCTTACCTCCCATGAAAAATTTCTCTCGATTCGAACCTGATAGCTTTATCGGGAATCCTCTGCTGTGTGGAAACTGGCTGGGATCAATCTGTGGACCTTATATGGAAAAATCTCGAGCAATGTTGTCGCGGACAGCGGTTGTTTGTATGACATTTGGATTCATTATATTGTTGTCGATGGTTATAATTGCTGTGTACAAATCTAATCCATCGAAGCAATTGATGAAGGGTTCTAGCAAGACTGGACAAGGCCCTCCAAATCTTGTGGTACTTCATATGGATATGGCCATTCACACCTTTGATGACATTATGAGAGTGACTGAGAACCTAAGCGAGAAGTACATTATTGGTTATGGAGCTTCGAGCACTGTGTACAAATGTTTACTGAAAAATTCCCGACCTATTGCAATTAAGCGACTATACAATCACTACGCCCACAATTTACGGGAGTTTGAGACCGAACTCGAAACCATTGGTAGTATCAGACATAGAAATCTTGTTATTCTTCATGGTTATTCACTATCTCCCTGTGGGAATCTCCTCTTCTATGACTACATGGAAAATGGTTCACTCTGGGATCTGCTTCATGGGGCAGGTAAGAAGGTTAAACTGGATTGGGAAGCACGTTTGAAGATTGCGGTTGGAGCTGCACAAGGGCTTGCATATCTTCACCATGATTGCGACCCGCGAATCATTCACCGGGACGTCAAGTCTTCAAATATTCTACTGGATGAAAATTTTGAGGCACATCTTTCTGATTTCGGGATTGCCAAATGTATCCCAACTGCCAAAACACACGCGTCGACTTATGTGCTTGGAACAATTGGCTACATTGATCCAGAGTATGCTCGGACCTCACGGCTTAATGAGAAGTCTGATGTTTATAGCTTTGGAATTGTTCTTCTTGAACTACTAACTGGGAAGAAAGCTGTGGATAATGAGTCCAATTTGCATCAACTGATATTGTCGAAGACTGATAACAATACTGTGATGGAAGCTGTCGATCCTGAGGTTTCGGTCACCTGCATGTATTTAGCTCATGTTCGAAAAACATTCCAGCTTGCTCTCCTCTGCACAAAACACAATCCTTCCGAGCGGCCAACCATGCACGAAGTTGCACGAGTATTGATCTCCCTCCAGCCACCACCACCTACTGTGAAACAAACTTCGTTCCCCACGAAAACGTTGGATTATGCACAATTCGTGATCGATAAGGGTCAGAATCAAAATGCAAAAAAGCAGGAGGAGCAGCAGAAATCAGATGTGAATTCTTCGGATGCTCGGTGGTTTGTTCGGTTTGGGGAAGTGATATCGGAACAACACAGTTTGAATCAATAA 2991 43.03 MKLIPFLPWPNLHMALLLFFFFFASSLLYSSPASSLPHDEGRALMSIKASFSNVANVLLDWDDDHNTDFCSWRGVFCDNVSLSVAALNLSNLNLGGEISPAIGDLRNLQSIDFQGNKLTGQIPDEIGNCGLLVHLDLSDNLLYGDIPFTISKLKQLEFLNLKNNQLTGPIPSTLTQIPNLKTLDLARNQLTGEIPRLIYWNEVLQYLGLRGNFLTGSLSSDMCQLTGLWYFDVRGNNLTGVIPDSIGNCTSFEILDISYNQISGEIPYNIGFLQVATLSLQGNRLTGKIPDVIGLMQALAVLDLSENELEGPIPPILGNLSYTGKLYLHGNKLTGPIPPELGNMSKLSYLQLNDNQLVGTIPSELGKLDQLFELNLASNYLEGPIPHNISSCTALNQFNVHGNRLNGSIALGFQELESLTYLNLSANNFKGRIPVELGRIINLDTLDLSCNYFSGPVPASIGDLEHLLSLNLSDNQLVGPIPAEFGNLRSVQIIDMSFNNFSGSIPMELGQLQNIMSLILNNNYLQGKIPDQLTNCFSLSNLNLSYNNLSGILPPMKNFSRFEPDSFIGNPLLCGNWLGSICGPYMEKSRAMLSRTAVVCMTFGFIILLSMVIIAVYKSNPSKQLMKGSSKTGQGPPNLVVLHMDMAIHTFDDIMRVTENLSEKYIIGYGASSTVYKCLLKNSRPIAIKRLYNHYAHNLREFETELETIGSIRHRNLVILHGYSLSPCGNLLFYDYMENGSLWDLLHGAGKKVKLDWEARLKIAVGAAQGLAYLHHDCDPRIIHRDVKSSNILLDENFEAHLSDFGIAKCIPTAKTHASTYVLGTIGYIDPEYARTSRLNEKSDVYSFGIVLLELLTGKKAVDNESNLHQLILSKTDNNTVMEAVDPEVSVTCMYLAHVRKTFQLALLCTKHNPSERPTMHEVARVLISLQPPPPTVKQTSFPTKTLDYAQFVIDKGQNQNAKKQEEQQKSDVNSSDARWFVRFGEVISEQHSLNQ 996
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 6312189 6318028 - Tan0015909.1 Tan07g0303 757834
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan07g0303 996 Pfam Leucine rich repeat 442 501 IPR001611 GO:0005515(InterPro)
Tan07g0303 996 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 312 585 - -
Tan07g0303 996 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 37 201 - -
Tan07g0303 996 SUPERFAMILY L domain-like 38 320 - -
Tan07g0303 996 SUPERFAMILY Protein kinase-like (PK-like) 638 928 IPR011009 -
Tan07g0303 996 Gene3D Ribonuclease Inhibitor 197 309 IPR032675 -
Tan07g0303 996 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 22 928 IPR050647 GO:0009553(PANTHER)|GO:0010103(PANTHER)|GO:0048481(PANTHER)
Tan07g0303 996 Pfam Protein kinase domain 664 924 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan07g0303 996 CDD STKc_IRAK 667 930 - -
Tan07g0303 996 Gene3D Phosphorylase Kinase; domain 1 627 736 - -
Tan07g0303 996 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 737 938 - -
Tan07g0303 996 SUPERFAMILY L domain-like 319 575 - -
Tan07g0303 996 Gene3D Transferase(Phosphotransferase) domain 1 737 939 - -
Tan07g0303 996 ProSiteProfiles Protein kinase domain profile. 661 930 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan07g0303 996 Gene3D Ribonuclease Inhibitor 310 584 IPR032675 -
Tan07g0303 996 ProSitePatterns Serine/Threonine protein kinases active-site signature. 782 794 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan07g0303 996 Pfam Leucine rich repeat N-terminal domain 38 78 IPR013210 -
Tan07g0303 996 SMART serkin_6 661 928 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan07g0303 996 ProSitePatterns Protein kinases ATP-binding region signature. 667 689 IPR017441 GO:0005524(InterPro)
Tan07g0303 996 SMART LRR_typ_2 225 249 IPR003591 -
Tan07g0303 996 SMART LRR_typ_2 177 201 IPR003591 -
Tan07g0303 996 SMART LRR_typ_2 153 176 IPR003591 -
Tan07g0303 996 SMART LRR_typ_2 105 129 IPR003591 -
Tan07g0303 996 SMART LRR_typ_2 296 320 IPR003591 -
Tan07g0303 996 SMART LRR_typ_2 344 368 IPR003591 -
Tan07g0303 996 SMART LRR_typ_2 512 536 IPR003591 -
Tan07g0303 996 SMART LRR_typ_2 416 440 IPR003591 -
Tan07g0303 996 SMART LRR_typ_2 464 487 IPR003591 -
Tan07g0303 996 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 202 311 - -
Tan07g0303 996 Pfam Leucine Rich Repeat 346 368 IPR001611 GO:0005515(InterPro)
Tan07g0303 996 Pfam Leucine Rich Repeat 228 249 IPR001611 GO:0005515(InterPro)
Tan07g0303 996 Pfam Leucine Rich Repeat 325 344 IPR001611 GO:0005515(InterPro)
Tan07g0303 996 Pfam Leucine Rich Repeat 253 273 IPR001611 GO:0005515(InterPro)
Tan07g0303 996 Pfam Leucine Rich Repeat 155 175 IPR001611 GO:0005515(InterPro)
Tan07g0303 996 Pfam Leucine Rich Repeat 179 198 IPR001611 GO:0005515(InterPro)
Tan07g0303 996 Pfam Leucine Rich Repeat 299 320 IPR001611 GO:0005515(InterPro)
Tan07g0303 996 Pfam Leucine Rich Repeat 538 555 IPR001611 GO:0005515(InterPro)
Tan07g0303 996 Pfam Leucine Rich Repeat 107 129 IPR001611 GO:0005515(InterPro)
Tan07g0303 996 Pfam Leucine Rich Repeat 418 438 IPR001611 GO:0005515(InterPro)
Tan07g0303 996 Gene3D Ribonuclease Inhibitor 37 196 IPR032675 -
Tan07g0303 996 ProSiteProfiles Leucine-rich repeat profile. 179 201 IPR001611 GO:0005515(InterPro)
Tan07g0303 996 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 632 736 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g3476 Tan-Chr1:100037468 Tan07g0303 Tan-Chr7:6312189 2.00E-18 dispersed
Tan01g3477 Tan-Chr1:100039036 Tan07g0303 Tan-Chr7:6312189 5.40E-149 dispersed
Tan07g0303 Tan-Chr7:6312189 Tan10g0587 Tan-Chr10:4804766 4.00E-67 dispersed
Tan07g0303 Tan-Chr7:6312189 Tan03g1728 Tan-Chr3:73213135 1.10E-64 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67835 PF00069 Pkinase 1.20E-41 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan07g0303 K20718 - csv:101213139 1818.13