Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan07g0368 ATGCCTCCATGGTGGGGGAAGTCATCATCAAAAGAAGCAAAGAAGAGCAAGGAAAGTTTTATCGACACATTGCAGAGAAAACTTAGAACCACTGATGGTAAAACAAACAGCAGATCAGGAGGGTCTCCAAGAAATTGCAACGATACAATTTCTGAGCAGGGATCTCGATCTCCTATTCTTTCGAGATCAGTATCACCTTCCAAACAAGTTTCAAGATGTCAAAGCTTTTGTGAAAGGCCACAAGCACAACCTCTTCCACTTCCTGGTTTGCAGCCGCCAATTGTAGGTCGTACAGACTCTGGAATTAGTATTTCACCAAAACCAAGTTCTGATAGGGGCTCCAAGCCATCATCACATCTACCACTCCCAAGACCAGCATGCTTCCCTAGGAGGCCAAACCATGCAGATTTAGATGCAGATCTTGGTGTTGGCTCAGTGTCCAGTGAGAGCTCAATTGATAGCACGGATCTACCAGATTCACGCCATCGCAGTCCTCAGGCAACTGACTATGACCTTGGGACTAAAACTGCTGCTGGCAGTCCTTCCAGTGTCATTGTCAAGGATCAGTCCTCTATTGTCAATCCACCAAGTTCGCGAGAGCCCAAAAAACCAGCAAATATCTCATTGAGCAACCACATTTTCTCCACATCACCCAAGCGGAGGCCCTTAAGCAGTCACGTTCCAAATCTGCAAGTTCCATATCATGGGAATTTATGTATTGCTCCAGACAGTTCAATGTCAAGTCCTTCTAGAAGTCCCATAAGGGCATTTAGCACAGAGCAAGTTATTAATAATGCTGTTAGTGCTGGAAAGTTCTATATGGATCTCACTTTTCCTGGATCAGGCCATTGTTCTAGTCCTGGTTCTGGTTACAATTCTGGGCATAATTCTATGGGTGGTGATTTGTCAGGGCAGTTATTTTTGCAACAAAGCCGGGGTAGCCCAGAATATTCACCAGCACCCAGTCCCAGAATGACCAGCCCTGGCCCTAGTTCCAGAGTCCATAGTGGTGCAGTGACCCCAATTCATCCTAGGGCGGGAGGGATACCAACTGAGTCACAGACAAGCTGGCCTGAGGAGAAGCAAACTCACCGCTTGCCTCTACCTCCTGTTGCGATTTCCAATGCTCCTTTTTCTCATTCCAATTCAGCTGCAACATCTCCCTCTGTTCCAAGAAGTCCTGGAAGGGCTGATAATCCAGCAAGCCCAGGCTCCCGGTGGAAAAAGGGGAAGCTTTTGGGTAGGGGTACTTTTGGGCATGTGTATGTTGGTTTTAACAGTGAAAGTGGTGAAATGTGTGCAATGAAGGAGGTTACATTATTTTCAGATGATGCAAAGTCCAAGGAGAGTGCCAAGCAATTAATGCAAGAAATTACCTTGTTGAGTCGTTTACGGCATCCAAATATTGTGCAGTATTATGGATCTGAAACGGTTGGCGACAGGCTTTACATTTACCTTGAATATGTATCTGGTGGCTCTATTTACAAGCTTCTCCAGGAATATGGACAGCTTGGAGAATCAGCACTTCGTAGTTATACTCAGCAAATATTGTCCGGGCTTGCATATTTACATGCTAAAAGTACTGTTCACAGGGATATCAAAGGAGCAAATATACTTGTTGATCCCACCGGGCGTGTTAAGTTGGCCGACTTTGGGATGGCAAAACATATCACTGGGCAATCATGCCCTTTGTCTTTTAAAGGCAGCCCGTACTGGATGGCTCCTGAGGTTATAAAAAACTCAAATGGTTGTAACCTTGCTGTGGATATTTGGAGTCTTGGATGCACTGTTTTGGAGATGGCAACAACAAAACCTCCTTGGAGTCAATATGAGGGAGTCGCTGCAATGTTTAAGATTGGCAACAGCAAAGAACTTCCTGAAATCCCGGATCACCTTCCACACGATGGAAAAGACTTTGTTAGACAATGTCTGCAACGAAATCCAGCTCATCGTCCTACAGCTGCTCAGCTGTTGGAGCATCCTTTTGTCAAACATGCTGCACCTCTTGAAAGACCGATTTTGGGTTCTGAACATTCAGATCCAACTCCAGGAATTACAAATGGAGTAAGAACTCTGGGTATTGAGCCAGGAAGGAATCCCAGCTTCTTGGATTCTGATAGATCTGCAGTTCATTCATCTAGGCTCTCAACAGCTGTTTTTCATTCCAGTGAAATCCATATTCCGAGGAACCTTTCATGTCCTGTTTCACCCATTGGAAGCCCTCTGGTGCACTCACGGTCGCCACAACATCCCAGTGGAAGAATGTCTCCATCGCCCATTTCTAGCCCTCGGAACTTGTCGGGTGCATCCACTCCTCTTACGGGAGGAAGTGGTGCTGTTCCACACCAGCACCTCAAACAATCACTGTACCTACAGGAGGGTTTTGGGAGCTTGCCAAAGCCTTCATTAGGTCCCTATAGTAATGGCCCTCCCTATCACGAAACGAACCCCGACATTTTTCAGGGGATTCAGCCAAGCTCCCACTTCTTCTCTGAGCAGTTTGGAAAGCCTGCCTGGGAATTGTATGACGGGCAGGCGGTCTTGGCTGATCGTGTTTCTAGGCAGCTGCTGAGTGATCACATAACAACTCCCTCCCTGGATTTAAGTCCCAGCTCTCTTTTGACCAACCGCAGATAG 2637 46.45 MPPWWGKSSSKEAKKSKESFIDTLQRKLRTTDGKTNSRSGGSPRNCNDTISEQGSRSPILSRSVSPSKQVSRCQSFCERPQAQPLPLPGLQPPIVGRTDSGISISPKPSSDRGSKPSSHLPLPRPACFPRRPNHADLDADLGVGSVSSESSIDSTDLPDSRHRSPQATDYDLGTKTAAGSPSSVIVKDQSSIVNPPSSREPKKPANISLSNHIFSTSPKRRPLSSHVPNLQVPYHGNLCIAPDSSMSSPSRSPIRAFSTEQVINNAVSAGKFYMDLTFPGSGHCSSPGSGYNSGHNSMGGDLSGQLFLQQSRGSPEYSPAPSPRMTSPGPSSRVHSGAVTPIHPRAGGIPTESQTSWPEEKQTHRLPLPPVAISNAPFSHSNSAATSPSVPRSPGRADNPASPGSRWKKGKLLGRGTFGHVYVGFNSESGEMCAMKEVTLFSDDAKSKESAKQLMQEITLLSRLRHPNIVQYYGSETVGDRLYIYLEYVSGGSIYKLLQEYGQLGESALRSYTQQILSGLAYLHAKSTVHRDIKGANILVDPTGRVKLADFGMAKHITGQSCPLSFKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPEIPDHLPHDGKDFVRQCLQRNPAHRPTAAQLLEHPFVKHAAPLERPILGSEHSDPTPGITNGVRTLGIEPGRNPSFLDSDRSAVHSSRLSTAVFHSSEIHIPRNLSCPVSPIGSPLVHSRSPQHPSGRMSPSPISSPRNLSGASTPLTGGSGAVPHQHLKQSLYLQEGFGSLPKPSLGPYSNGPPYHETNPDIFQGIQPSSHFFSEQFGKPAWELYDGQAVLADRVSRQLLSDHITTPSLDLSPSSLLTNRR 878
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 7326783 7331475 + Tan0002010.1 Tan07g0368 757899
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan07g0368 878 Pfam Protein kinase domain 408 663 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan07g0368 878 MobiDBLite consensus disorder prediction 1 207 - -
Tan07g0368 878 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 36 668 IPR050538 -
Tan07g0368 878 MobiDBLite consensus disorder prediction 740 781 - -
Tan07g0368 878 MobiDBLite consensus disorder prediction 800 819 - -
Tan07g0368 878 MobiDBLite consensus disorder prediction 10 33 - -
Tan07g0368 878 SMART serkin_6 407 663 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan07g0368 878 FunFam Mitogen-activated protein kinase kinase kinase 405 687 - -
Tan07g0368 878 MobiDBLite consensus disorder prediction 283 317 - -
Tan07g0368 878 MobiDBLite consensus disorder prediction 169 207 - -
Tan07g0368 878 MobiDBLite consensus disorder prediction 283 410 - -
Tan07g0368 878 MobiDBLite consensus disorder prediction 34 78 - -
Tan07g0368 878 ProSiteProfiles Protein kinase domain profile. 407 663 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan07g0368 878 MobiDBLite consensus disorder prediction 742 777 - -
Tan07g0368 878 ProSitePatterns Protein kinases ATP-binding region signature. 413 436 IPR017441 GO:0005524(InterPro)
Tan07g0368 878 SUPERFAMILY Protein kinase-like (PK-like) 405 749 IPR011009 -
Tan07g0368 878 CDD STKc_MEKK1_plant 406 663 - -
Tan07g0368 878 MobiDBLite consensus disorder prediction 375 393 - -
Tan07g0368 878 MobiDBLite consensus disorder prediction 102 116 - -
Tan07g0368 878 Gene3D Transferase(Phosphotransferase) domain 1 405 680 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan03g1514 Tan-Chr3:71414674 Tan07g0368 Tan-Chr7:7326783 3.30E-78 dispersed
Tan03g1515 Tan-Chr3:71414674 Tan07g0368 Tan-Chr7:7326783 4.20E-54 dispersed
Tan07g0368 Tan-Chr7:7326783 Tan08g0555 Tan-Chr8:5391703 1.10E-71 dispersed
Tan03g1303 Tan-Chr3:69495962 Tan07g0368 Tan-Chr7:7326783 5.50E-123 transposed
Tan04g2362 Tan-Chr4:82123935 Tan07g0368 Tan-Chr7:7326783 2.10E-53 transposed
Tan01g0227 Tan-Chr1:2023667 Tan07g0368 Tan-Chr7:7326783 0.00E+00 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67836 PF00069 Pkinase 1.10E-71 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan07g0368 K20717 - csv:101222716 1622.83