Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan07g0434 ATGAGCTTCAAAAGGGACCTTGAGCTTGTCGTCTTCGGTTTCTCTGCAGTCTTCTGGTTTGCAGTAACTTTTTATCCGGTCATGTCGGAGCCGATCAAAGACAAGGAAGCTTTGCTTAATTTTCTCAACAAGATGGATCATTCACGCTCACTCAATTGGAAGGAGAGCACTTCTTTGTGCAAAGAATGGATGGGAGTTCAATGCAACAATGATGAATCCCAAGTTGTAGTTCTGAGATTGGCTGAAGTTGGCTTACATGGTTCGATCCCGATCAACACTCTCGGTCGACTATCGGGACTTAAAACGCTAAGCCTTGGATCGAATTACCTATCAGGGCCTTTCCCTTCCGACTTCCTAAAGCTGAGAAATCTTAACTCACTCTACTTGCAAAACAACAAGTTTTCTGGTCCATTGCCATTGGATTTCTCGGTATGGAAGAATCTCAGCATCATTGATATGTCAAACAATGCCTTCAATGGGAGCATCCCTCGCTCGATTTCGAGCACAACGCATCTAACGACGTTAAACCTTGCCAATAACTCTCTCTCTGGTGAGATTCCAGATCTCCACCTTCCTAGTTTGCAAGAGTTGGATCTTTCAAACAACTATCTCACAGGGTATGTCCCTCAGTCCCTTATAAAATTTCCAAGTTGGGCATTCTCCGGTAACAACCTCATGCTCGAAAATGCCGTTCCTCGAGCTCGTCTCGAACCGTCGTCCAATGCTCAACCATTGAAGAAAGGCACAACATCACTTGGTGAAGCAGCAATTCTAGGCATTATAATTGGAGGTTCAGCAATGGGGTTAGTTATAGCAGCCATTTTGATGGTTATGTGCTGCTCAAACAGAGGAAGAATAAAAAACAAAGCCTCATCCAAACTGGACAAGCAAGAACTGTTTGTGAATAAAAGGGTGTCTGAGACACAAAGCAACAATCTCAAGTTTTTCCAGAGTCACATCCTTGAGTTTGACTTGGAGGACTTGTTGAGGGCGTCTTCCGAGGTGCTCGGGAAGGGGACGTCGGGGACGACGTATAAGGCGACATTAGAAGACGGTAATGCTGTAGCAGTGAAGAGGTTGAAGGAAGTGTGTGTTTCAAAGAAGGAATTTGAGCAGCAGATGGAACTGTTTGGGAGCATTGAACATGAAAATGTGTGTGCTTTAAGGGCATATTATTATTCAAAGGATGAGAAACTCATGGTCTTTGACTTCTACCAGCATGGAAGTGTCTCTGCAATGTTACATGTTGCGAGAGAGAAAGGCCAGTCCCCTTTAGACTGGGAAACTCGACTCCGAATCGCCATTGGCGCAGCCAAAGGAATCGCTCACATCCACTCAGAAGACTGCGGTAAACTCGTCCATGGCAACATCAAGGCATCTAACGTCTTCCTCAACTCCACCGGCTACGGTTGCATCTCCGACGCCGGCGTCGCCTCTCTGATGAACCTCATGGCCCCGCCGGCCACCAGAGCCGCTGGATACCGCGCTCCCGAACTCAAAGACTCTCGCAAAGCATCTCAAACCTCCGATACCTACAGCTTCGGCGTCGTGCTTCTCGAGCTTCTAACCGGGAAATTTCCACTCCACACGAAGGGCGGCGGTGGCGATCAGATCATCCACCTTGTGCGGTGGGTGAACGCGGTGGTCCGTGAGGAGTGGACGGCGGAGGTGTTCGATGTGGAGCTTCTAAAGTATCCGAACATAGAGGAAGAGATGTTAGAGACGCTGCAAATAGCGCTATCTTGTGTAGGAAGAGTTCCGGATGATCGGCCGGTAATGGCGGATGTAGCAGCTCGTTTGGAGGGAGTTCGCCAGGATAACGGCGGAGGAAACGCACCGCCGCCGCCATCAGCATTGGAACGTGGAGCGGAGGATGTGATCCAGGTTCAGGTGAATGTGGCTGAGGATGAAGGTGGAGCTCCTTCGAGATCGAATTGA 1938 48.61 MSFKRDLELVVFGFSAVFWFAVTFYPVMSEPIKDKEALLNFLNKMDHSRSLNWKESTSLCKEWMGVQCNNDESQVVVLRLAEVGLHGSIPINTLGRLSGLKTLSLGSNYLSGPFPSDFLKLRNLNSLYLQNNKFSGPLPLDFSVWKNLSIIDMSNNAFNGSIPRSISSTTHLTTLNLANNSLSGEIPDLHLPSLQELDLSNNYLTGYVPQSLIKFPSWAFSGNNLMLENAVPRARLEPSSNAQPLKKGTTSLGEAAILGIIIGGSAMGLVIAAILMVMCCSNRGRIKNKASSKLDKQELFVNKRVSETQSNNLKFFQSHILEFDLEDLLRASSEVLGKGTSGTTYKATLEDGNAVAVKRLKEVCVSKKEFEQQMELFGSIEHENVCALRAYYYSKDEKLMVFDFYQHGSVSAMLHVAREKGQSPLDWETRLRIAIGAAKGIAHIHSEDCGKLVHGNIKASNVFLNSTGYGCISDAGVASLMNLMAPPATRAAGYRAPELKDSRKASQTSDTYSFGVVLLELLTGKFPLHTKGGGGDQIIHLVRWVNAVVREEWTAEVFDVELLKYPNIEEEMLETLQIALSCVGRVPDDRPVMADVAARLEGVRQDNGGGNAPPPPSALERGAEDVIQVQVNVAEDEGGAPSRSN 645
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 8202903 8207844 + Tan0011407.3 Tan07g0434 757965
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan07g0434 645 ProSiteProfiles Leucine-rich repeat profile. 171 192 IPR001611 GO:0005515(InterPro)
Tan07g0434 645 FunFam Probable inactive receptor kinase RLK902 31 190 - -
Tan07g0434 645 Gene3D Transferase(Phosphotransferase) domain 1 406 610 - -
Tan07g0434 645 ProSitePatterns Protein kinases ATP-binding region signature. 336 358 IPR017441 GO:0005524(InterPro)
Tan07g0434 645 Gene3D Ribonuclease Inhibitor 33 141 IPR032675 -
Tan07g0434 645 SUPERFAMILY L domain-like 47 217 - -
Tan07g0434 645 MobiDBLite consensus disorder prediction 601 621 - -
Tan07g0434 645 Pfam Leucine Rich Repeat 147 168 IPR001611 GO:0005515(InterPro)
Tan07g0434 645 ProSiteProfiles Protein kinase domain profile. 330 603 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan07g0434 645 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 405 611 - -
Tan07g0434 645 Pfam Leucine Rich repeats (2 copies) 170 205 IPR025875 -
Tan07g0434 645 Gene3D Phosphorylase Kinase; domain 1 296 404 - -
Tan07g0434 645 SUPERFAMILY Protein kinase-like (PK-like) 318 601 IPR011009 -
Tan07g0434 645 FunFam pollen receptor-like kinase 1 300 404 - -
Tan07g0434 645 PANTHER OS05G0588300 PROTEIN 20 615 IPR050994 -
Tan07g0434 645 Pfam Leucine rich repeat N-terminal domain 33 69 IPR013210 -
Tan07g0434 645 Pfam Leucine rich repeat 88 134 IPR001611 GO:0005515(InterPro)
Tan07g0434 645 PRINTS Leucine-rich repeat signature 172 185 - -
Tan07g0434 645 PRINTS Leucine-rich repeat signature 191 204 - -
Tan07g0434 645 Pfam Protein tyrosine and serine/threonine kinase 333 599 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan07g0434 645 Gene3D Ribonuclease Inhibitor 142 246 IPR032675 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan07g0434 Tan-Chr7:8202903 Tan07g0436 Tan-Chr7:8203060 0.00E+00 dispersed
Tan07g0434 Tan-Chr7:8202903 Tan07g0435 Tan-Chr7:8203060 0.00E+00 tandem
Tan01g0164 Tan-Chr1:1496340 Tan07g0434 Tan-Chr7:8202903 5.70E-160 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67837 PF00069 Pkinase 7.70E-31 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan07g0434 - - - 0.0