Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan07g0460 ATGACTTATCTGCAGGAGAAAATTGTGAGGTTTCAGGACCGGAGTTCAGATAAAACTTCAAGGGGTTTATATTCTGCAGATAACACTTTAAATGCCGGAAAGAATGGGACAAGAGCCGAGTTGATTTCAGAAAAACCTCTTAAAGAATTGGAAACTGGTTCTTACAGGATTAATAGACTTAAAAAATCCTTGAAATCATCTTCTTTCAATAAGTTTATGTCAACAGGTTTTGGAACCGGAAAAAAAGTACTTGACCCACAGGGGCCCTTTCTCCAGAAGTGGAATAAGATATTTGTGTTGTCTTGTGTGATTGCGGTCTCGTTGGATCCCTTGTTCTTTTATGTCCCTGTGATGGATAATGATCAGAAATGTCTTGGGTTGGATACGAAGATGGAGATTACGGCTAGTGTGTTACGTTCATTCACCGACATATTTTATATTTTACATATTGTTTTTCAATTTCGTACGGGATTTATCGCTCCTTCTTCTCGAGTATTTGGAAGAGGTGTTCTAGTTGAAGATGCTTGGGCAATAGCAAAGAGATATCTGTCATCATACTTTTTGATTGACATTCTTGCAGTCCTCCCACTTCCACAAGTAGTGATTCTGATAATTATTCCAAACATGAAAGGCTCAAGGTCGTTGAATACCAAGGACTTACTGAAGTTTGTTGTTTTCTTCCAATACGTGCCGCGGTTTATCAGAATCTATCCTTTATATAAAGAAGTTATAAGAACATCTGTACTCACAGAAACCGCATGGGCTGGAGCTGCATTTAATCTCTTTCTCTACATGCTGGCAAGTCATGTTTTTGGAGCATTCTGGTACTTGTTTTCTATAGAACGGGAAACTACATGCTGGCAGAGGGCTTGTCATGAACATAATCAAACCGACTGTGCGAAGTCACTATATTGTGATGTTTATGTCAATCAACGAAATAACTCATTTTTAAACGTTTCATGTCCTCTTGTGGATGGAGACAAAGACAAACCACCTTTTGATTTTGGAATATTTCTTGATGCTCTTAATTCTGGTGTTGTGGAGTCGATGAATTTTCCACAGAAGTTCTTTTACTGTTTCTGGTGGGGTCTGAGAAATCTAAGTTCCCTGGGTCAAAATCTCCAAACAAGCACATACGTATGGGAAATTTGCTTTGCTGTTTTCATCTCCATCTCTGGCTTAGTTCTGTTTTCATTTCTCATCGGGAACATGCAGACATATTTGCAATCCACCACTACAAGATTGGAAGAAATGAGGGTTAGAAGGAGAGATGCAGAACAATGGATGTCCCACCGTTTACTCCCTGAGAGCCTCCGAGAGCGAATCAGGAGGTATGAACAGTACAAGTGGCAGGAAACGAGAGGTGTTGATGAAGAGAATCTGGTTCGAAATCTTCCAAAAGATCTCAGAAGGGACATAAAACGCCATCTCTGCTTGTCTCTGCTAATGAGGGTACCGATGTTTGAAAAAATGGACGAACAATTGTTGGATGCTATGTGTGACCGTCTCAAGCCAGTACTATACACGGAGGAAAGTTACATCGTTAGGGAAGGAGACCCGGTGGACGAGATGGTCTTCATTATGCGAGGCAAGTTATTGTCTGTAACTACAAATGGTGGAAGAACTGGTTTCTTTAATTCTGAACACCTCAAGGCGGGTGATTTCTGTGGAGAAGAGTTACTGACATGGGCTCTGGATCCACATTCCTCATCTAATCTACCAATTTCGACGAGAACCGTTCGAACTCTTTCGGAAGTTGAAGCATTTGCTTTAAAGGCAGATGACTTGAAGTTTGTAGCCTCACAGTTCCGACGGCTTCATAGCAAGCAGCTGCGGCACACTTTCAGGTTTTATTCGCAGCAATGGAGGACATGGGCAGCATGCTTTATACAAGCAGCATGGCGTCGATATAGAAGAAAGAAGCACGAACAGGCTCTCTTGGAAGAAGAGAACAGGTTAAAAGATGCATTGGCCAAGACAGGTGGGAGTTCTCCTAGTTTAGGTGCTACCATCTATGCATCCAGATTTGCAGCTAACATCCTTCGAACAATTCGACGCACAAGCTCACGTAAGGCCAGGATTCCGGAGAGAATACCGCCCATGTTGCTTCAGAAACCAGCAGAGCCTGATTTTACCTCTGAAGAGAATAGTTGA 2154 41.78 MTYLQEKIVRFQDRSSDKTSRGLYSADNTLNAGKNGTRAELISEKPLKELETGSYRINRLKKSLKSSSFNKFMSTGFGTGKKVLDPQGPFLQKWNKIFVLSCVIAVSLDPLFFYVPVMDNDQKCLGLDTKMEITASVLRSFTDIFYILHIVFQFRTGFIAPSSRVFGRGVLVEDAWAIAKRYLSSYFLIDILAVLPLPQVVILIIIPNMKGSRSLNTKDLLKFVVFFQYVPRFIRIYPLYKEVIRTSVLTETAWAGAAFNLFLYMLASHVFGAFWYLFSIERETTCWQRACHEHNQTDCAKSLYCDVYVNQRNNSFLNVSCPLVDGDKDKPPFDFGIFLDALNSGVVESMNFPQKFFYCFWWGLRNLSSLGQNLQTSTYVWEICFAVFISISGLVLFSFLIGNMQTYLQSTTTRLEEMRVRRRDAEQWMSHRLLPESLRERIRRYEQYKWQETRGVDEENLVRNLPKDLRRDIKRHLCLSLLMRVPMFEKMDEQLLDAMCDRLKPVLYTEESYIVREGDPVDEMVFIMRGKLLSVTTNGGRTGFFNSEHLKAGDFCGEELLTWALDPHSSSNLPISTRTVRTLSEVEAFALKADDLKFVASQFRRLHSKQLRHTFRFYSQQWRTWAACFIQAAWRRYRRKKHEQALLEEENRLKDALAKTGGSSPSLGATIYASRFAANILRTIRRTSSRKARIPERIPPMLLQKPAEPDFTSEENS 717
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 8450611 8458086 + Tan0011420.1 Tan07g0460 757991
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan07g0460 717 Gene3D Jelly Rolls 485 605 IPR014710 -
Tan07g0460 717 ProSiteProfiles cAMP/cGMP binding motif profile. 487 571 IPR000595 -
Tan07g0460 717 CDD CAP_ED 487 618 IPR000595 -
Tan07g0460 717 SUPERFAMILY cAMP-binding domain-like 416 609 IPR018490 -
Tan07g0460 717 Gene3D - 96 411 - -
Tan07g0460 717 Pfam Ion transport protein 95 414 IPR005821 GO:0005216(InterPro)|GO:0006811(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Tan07g0460 717 Coils Coil 639 659 - -
Tan07g0460 717 FunFam Cyclic nucleotide-gated ion channel 1 414 478 - -
Tan07g0460 717 FunFam Cyclic nucleotide-gated ion channel 1 485 603 - -
Tan07g0460 717 Gene3D Helix hairpin bin 413 478 - -
Tan07g0460 717 SMART cnmp_10 487 618 IPR000595 -
Tan07g0460 717 SUPERFAMILY Voltage-gated potassium channels 85 409 - -
Tan07g0460 717 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 62 705 - -
Tan07g0460 717 Pfam Cyclic nucleotide-binding domain 508 599 IPR000595 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g0131 Tan-Chr1:1248948 Tan07g0460 Tan-Chr7:8450611 2.70E-83 dispersed
Tan01g0138 Tan-Chr1:1294459 Tan07g0460 Tan-Chr7:8450611 2.00E-139 dispersed
Tan01g0139 Tan-Chr1:1294459 Tan07g0460 Tan-Chr7:8450611 5.50E-99 dispersed
Tan01g0140 Tan-Chr1:1309758 Tan07g0460 Tan-Chr7:8450611 9.10E-235 dispersed
Tan07g0460 Tan-Chr7:8450611 Tan08g0725 Tan-Chr8:7495317 4.60E-206 dispersed
Tan07g0460 Tan-Chr7:8450611 Tan07g0461 Tan-Chr7:8450611 3.20E-292 tandem
Tan01g0130 Tan-Chr1:1248948 Tan07g0460 Tan-Chr7:8450611 2.70E-83 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan07g0460 K05391 - csv:101221781 1336.24