Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan07g0472 | ATGAACAACTACAACAAGCTCCATTCCTCCGTCTCCGGCGACACGCCGACCACCTCCGAACTTTCCCACGATCCCAATCGCGGCCCCTCGCTGCCTCCTCCGCTGTCGTCCACCTCACGCCGCCGCACCCGAATCCTCTTCATCTCCCTCCTCTCCATCCTCCTCATCACGGCCTCAGCCGTGTCCGCCGCCGTCCTGATCCGCTCCCACATCGGTGGCGCCACCTCCTCCGAAGCCCATTTCCCTCACAACAAACCCAGCCAAGCCATCTCCCGCGCCTGCAGCCTGACTCTCTACCCTTCCCTCTGCCTCTCCTCCCTTCTCTCCTTCCCCGGCTCCCTCTCCGCCGACGTCCACGACCTCGTTCACATCACTCTCAACCTCACGCTCCAGCATCTCAACAAAGCTCTCTATTCCTCTTCTCAAATCCCCATCTCCCAATTCTCTAATAATCCACTCGCTCATTCCGCTTATGAAGACTGTATGGAGCTCCTAAACGACGCCGTCGACGCCTTCTCCCTCTCTCTCTTCTCCCCCGCCGCCTCCAACCACGACGTCGTGACGTGGCTCAGCGCGGCGTTGACTTATCATGACACGTGTATGGACGGATTTGCGGATGTGGCTGACCCTGTCAAGGATCAGATGGCCGCGAAGCTCAGTGATTTGTCGGAGATGATTAGTAATTCTTTGGCGATTTTTTCTGGGTTTGGTGGGGGGTTGCCGGTGCAGAACAGGCGGCGGCGGCGGTTGATGGACAGTGGAAGTGAGTGGGCGGCGGAGAATGGTGTAACGGAGGGAGAGTTTCCTGAGTGGGTCAGTGGGAAGGATCGCCGGCTTTTGGCTACTCCCATTTCCGCGATTCAGGCGGATATTGTGGTGGCGAAAGATGGGAGTGGGAAGTTTAAGACGGTGGCGGAGGCCATTGCGGCGGCGCCGTCGTCAAGTGGTCGACGGATCGTCATCTACATTAAGGCTGGAAAGTACGAAGAGGAGAATTTGAAGGTGGGAAGGAAGAAAACAAACTTGATGTTTGTGGGAGATGGGAAGGGCATAACCGTCATTTCAGGTGGCAAAAGCATTTTTGACAAAGTTACCACTTTTCGCACGGCTACCTTTGCGGGTTCTGGGACAGGAATAATTCTACGAGACATGACGTTCGAGAACACGGCGGGGCCGAGCAAGCACCAAGCAGTGGCCCTACGGTTGAGCGCGGACCACGCGGTGGTATACCATTGCAACATCATCGGCTATCAAGACACACTGTACGTGCACTCGAACCGACAGTTCTTTCGGGAGTGCGACATATACGGAACGGTGGACTTCATCTTCGGCAACGCCGTGGTGGTGTTCCAAAGCTGCAACATATACGCTCGGAAGCCAATGCCGCAACAAAAAAACACCATCACCGCCCAAGACCGGAAGGACCCCAACCAGAACACCGGAATCTCCATCCACGCTTGCAAGATCCTCGCCACCGCCGACCTCCAACCCTCCAAATCCTCTTTCCCCACTTTCCTCGGACGCCCCTGGAAATTATACTCTAGAGTCGTTTACATGGTTTCTTCAATCGGGGACCACATTCATCCACGTGGCTGGCTCGAGTGGCAGGGCTCTTTCGCTCTCGACACTCTTTACTACGGCGAGTATATGAATTCCGGCCCCGGTGCCGCCGTCGGTCAGCGGGTCAAATGGCCCGGTTATCGGGTCATTACTTCTACCCTTGAAGCCACCAAATTTACCGTTGGCCAGTTTATTTACGGCTCCTCTTGGCTGCCCTCCACTGGCGTCTCCTTTTCGGCTGGATTATCTGCTAACTAA | 1818 | 56.0 | MNNYNKLHSSVSGDTPTTSELSHDPNRGPSLPPPLSSTSRRRTRILFISLLSILLITASAVSAAVLIRSHIGGATSSEAHFPHNKPSQAISRACSLTLYPSLCLSSLLSFPGSLSADVHDLVHITLNLTLQHLNKALYSSSQIPISQFSNNPLAHSAYEDCMELLNDAVDAFSLSLFSPAASNHDVVTWLSAALTYHDTCMDGFADVADPVKDQMAAKLSDLSEMISNSLAIFSGFGGGLPVQNRRRRRLMDSGSEWAAENGVTEGEFPEWVSGKDRRLLATPISAIQADIVVAKDGSGKFKTVAEAIAAAPSSSGRRIVIYIKAGKYEEENLKVGRKKTNLMFVGDGKGITVISGGKSIFDKVTTFRTATFAGSGTGIILRDMTFENTAGPSKHQAVALRLSADHAVVYHCNIIGYQDTLYVHSNRQFFRECDIYGTVDFIFGNAVVVFQSCNIYARKPMPQQKNTITAQDRKDPNQNTGISIHACKILATADLQPSKSSFPTFLGRPWKLYSRVVYMVSSIGDHIHPRGWLEWQGSFALDTLYYGEYMNSGPGAAVGQRVKWPGYRVITSTLEATKFTVGQFIYGSSWLPSTGVSFSAGLSAN | 605 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 8595177 | 8601317 | + | Tan0005200.1 | Tan07g0472 | 758003 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan07g0472 | 605 | SUPERFAMILY | Plant invertase/pectin methylesterase inhibitor | 88 | 234 | IPR035513 | - | |
Tan07g0472 | 605 | Gene3D | Invertase/pectin methylesterase inhibitor family protein | 87 | 236 | IPR035513 | - | |
Tan07g0472 | 605 | MobiDBLite | consensus disorder prediction | 1 | 38 | - | - | |
Tan07g0472 | 605 | ProSitePatterns | Pectinesterase signature 2. | 435 | 444 | IPR033131 | - | |
Tan07g0472 | 605 | Gene3D | - | 284 | 602 | IPR012334 | - | |
Tan07g0472 | 605 | Pfam | Plant invertase/pectin methylesterase inhibitor | 89 | 232 | IPR006501 | GO:0004857(InterPro) | |
Tan07g0472 | 605 | SUPERFAMILY | Pectin lyase-like | 285 | 601 | IPR011050 | - | |
Tan07g0472 | 605 | Pfam | Pectinesterase | 290 | 587 | IPR000070 | GO:0030599(InterPro)|GO:0042545(InterPro) | |
Tan07g0472 | 605 | FunFam | Pectinesterase | 284 | 602 | - | - | |
Tan07g0472 | 605 | SMART | PMEI_2 | 85 | 232 | IPR006501 | GO:0004857(InterPro) | |
Tan07g0472 | 605 | PANTHER | PECTINESTERASE | 46 | 593 | - | GO:0030599(PANTHER)|GO:0046910(PANTHER) | |
Tan07g0472 | 605 | NCBIfam | pectinesterase inhibitor domain | 79 | 234 | IPR006501 | GO:0004857(InterPro) | |
Tan07g0472 | 605 | CDD | PMEI-like_3 | 93 | 238 | - | - | |
Tan07g0472 | 605 | MobiDBLite | consensus disorder prediction | 1 | 25 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan06g0779 | Tan-Chr6:6141224 | Tan07g0472 | Tan-Chr7:8595177 | 1.00E-144 | dispersed | |
Tan06g1245 | Tan-Chr6:13834761 | Tan07g0472 | Tan-Chr7:8595177 | 3.50E-103 | dispersed | |
Tan06g1246 | Tan-Chr6:13886207 | Tan07g0472 | Tan-Chr7:8595177 | 9.60E-101 | dispersed | |
Tan07g0472 | Tan-Chr7:8595177 | Tan11g1757 | Tan-Chr11:18067381 | 5.90E-122 | dispersed | |
Tan08g2262 | Tan-Chr8:74117403 | Tan07g0472 | Tan-Chr7:8595177 | 1.30E-123 | transposed | |
Tan01g0107 | Tan-Chr1:1054518 | Tan07g0472 | Tan-Chr7:8595177 | 1.60E-212 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan07g0472 | - | - | - | 0.0 |