Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan07g0521 ATGGCTTCGGATCCGAAGGTTCATCTGTTCGAGGAAGTGGCAAAGCACAACAAAACGAAAGATTGTTGGCTTGTAATCTCTGGGAAGGTTTATGATGTAACTCCTTTCATGGAGGATCACCCCGGAGGCGATGAAGTATTATTGTCTGCAACTGGAAAAGATGCCACGAACGATTTCGAAGATGTCGGGCACAGCGATTCGGCAAGAGAAATGATGGACAAATATTACATCGGAGAAATTGATCCTTCAACAGTTCCTTTGAAGAAGATTTACATCCCATCACAACAAACCCAGTTCAACCAAGATAAGACACCTGAGTTTGTGATTAAGATCTTGCAGTTTCTGGTTCCCATATTGATTTTGGGTTTGGCTTTTGCTGTTCGACACTACACCAAGAATGAATGA 405 42.47 MASDPKVHLFEEVAKHNKTKDCWLVISGKVYDVTPFMEDHPGGDEVLLSATGKDATNDFEDVGHSDSAREMMDKYYIGEIDPSTVPLKKIYIPSQQTQFNQDKTPEFVIKILQFLVPILILGLAFAVRHYTKNE 134
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 8904175 8907264 + Tan0006299.1 Tan07g0521 758052
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan07g0521 134 Pfam Cytochrome b5-like Heme/Steroid binding domain 11 80 IPR001199 -
Tan07g0521 134 Gene3D - 1 86 IPR036400 -
Tan07g0521 134 PRINTS Cytochrome B5 signature 30 40 IPR001199 -
Tan07g0521 134 PRINTS Cytochrome B5 signature 40 54 IPR001199 -
Tan07g0521 134 PRINTS Cytochrome B5 signature 55 62 IPR001199 -
Tan07g0521 134 PRINTS Cytochrome B5 signature 68 80 IPR001199 -
Tan07g0521 134 PANTHER CYTOCHROME B5 6 132 IPR050668 GO:0016020(PANTHER)|GO:0020037(PANTHER)|GO:0043231(PANTHER)
Tan07g0521 134 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 4 87 IPR036400 -
Tan07g0521 134 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 5 81 IPR001199 -
Tan07g0521 134 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 36 43 IPR018506 GO:0020037(InterPro)
Tan07g0521 134 SMART Cyt_b5_2 8 81 IPR001199 -
Tan07g0521 134 FunFam Cytochrome b5 type B 2 85 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan06g1866 Tan-Chr6:47175157 Tan07g0521 Tan-Chr7:8904175 1.50E-30 dispersed
Tan06g2314 Tan-Chr6:74361886 Tan07g0521 Tan-Chr7:8904175 9.00E-47 dispersed
Tan07g0521 Tan-Chr7:8904175 Tan10g0527 Tan-Chr10:4230019 1.40E-52 dispersed
Tan07g0521 Tan-Chr7:8904175 Tan07g0522 Tan-Chr7:8904175 1.30E-56 tandem
Tan06g1967 Tan-Chr6:61804512 Tan07g0521 Tan-Chr7:8904175 3.80E-09 transposed
Tan10g0077 Tan-Chr10:1104879 Tan07g0521 Tan-Chr7:8904175 5.40E-38 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan07g0521 K23490 - csv:101207109 268.855