Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan07g0565 ATGAAGCAATGGGGAGGTCTAAATTCAGAATCCATTGCAACCTTATGGGTATTGTGCACGGCTCTTGCTCTTGCTCCAATTGTTGGATCAGTCTCCTCTCCAAAGCACCAGTTTCGTGGAGTTGCTCCCCAAGATGAGACGTATTACAAGTCGTCGGACATGATCAAATGTAGAGATGGTTCCAACAAATTTTCCAAGGCTCAGCTTAACGATGACTACTGCGATTGCCTTGATGGCACGGACGAACCTGGCACATCCGCATGCCCAAGTGGAAAGTTCTATTGTCGAAATGCAGGGCACGTTCCACTTTTGTTGTTTTCTTCAAGGGTGAACGACGGTATATGTGATTGTTGTGATGGAAGTGACGAATATGACAGCAAAGTCAAATGCCCAAATACGTGCTGGGAAGCCGGGAAAGTGGCAAGAGATAAATTGAAGAAAAAGATTGCAACCTTTGAAGAAGGTGTTAAAATTCGTAGACAAGAAATTGAACATGCAAAAGTTGCTGTAACCAACGATGAGGCTGAGCTATTGAAGTTGAAAAATGAGGAAAAAGTATTAAAAATGCTCGTGGAACAACTCACAGAGCGCAAAGAACAAATAGAGAAGGTAGAAGAGGAGGAGCGATTATTGAAAGAAAAAGAAGAGAAGAAACGTTTGGAGAGAGAAAAAGATGAGACTAAAAAAATTGAGTCATCAGAAACAACTAATGTTGGGGAAAGCAAAACTCAAGAGGAAGACAATTGGGAAAAAAATGAAGCTATAGAACATGATGACAAGGAATATAAACAAGGAGAAGACAATGATGATGATAAAATTGGGAACTTGGAGGACTCTGCCACAGATGAGGCTAGGGTGGAAGAAGAAGTTGACTCAGAACTTGAAGCTCAACTTCCTAATAAACCTGAAACAGGAGCACCATTGCTGAAAGAGGTAGAAGAGGATACAGCAGTAGAGAAAGACAAACCCCTGGCTAAATCTGAAACTGGAGAAAGTGCTGGCACTAAGGAATCATCGGAAGAAGTCCTGAGAAAGAATGATGCTAGTTCAGAGGAGTTGTCACGGGAAGAGTTGGGCCGCCTTGTTGCTTCTCGTTGGACAGGAGAAAATACTGAAGAACAGTCGGGCAACGTGGATAGTACGAACAATAGTGATGAAGAAAGTCATGATATCTTAAAAGACACACATGACGATGACGGTTATGCTTCAGAGACTGATGATGATCACCAAAAATACGATGATGACCACCATAGATACGATGATGACCTAGAGGATGATTTAGATGATGACAGAGATGAAAATCATGATGATTCTACTTCGTCAGAGAGATATTATTCAGATGCAGAATTGGACTCCCCAGATGTGGAAGCCCAAAGTAACCCCACCTGGCTTGAGAAGATACAAAAAACTGTTCGAAATGTCCTCAAAGCTGTAAATATATTCCAGTCTCCAGTGAACCAATCAGATGCTGCGAACGTGCGCAAGGAATATGATGAATCCACTGCCAGGTTGTCAAAAGTACAGTCAAGGATCTCAAGTTTATCACAAAAGCTAAAGAATGATTTTGGTCCAGAGAAGGAGTTCTATTCATTTTATGACCAATGTTTTGAAAGCAAGCAGAACAAATACGTTTACAAAATCTGCCCTTACAAACAAGCTTCACAGGTTGAGGGGCACTCGACAACTCGTTTGGGGCGCTGGGATAAATTTGAGGACTCATATAGGGTTATGATCTTTTCAAGTGGGGATACTTGCTGGAATGGACCTGACAGAAGCTTGAAGGTGAAGCTAAGATGTGGGCTTAAAAATGACGTAACCGATGTAGATGAACCAAGCCGTTGCGAATACATGGCCTTGTTATCAACCCCAGCTGCTTGTGTAGAGGAAAAACTTCAGGAACTGAAAAACAAGTTGGACATGCTGAATAAAGAAGAGGCAGAGAAGCATGATGAACTTTGA 1959 41.91 MKQWGGLNSESIATLWVLCTALALAPIVGSVSSPKHQFRGVAPQDETYYKSSDMIKCRDGSNKFSKAQLNDDYCDCLDGTDEPGTSACPSGKFYCRNAGHVPLLLFSSRVNDGICDCCDGSDEYDSKVKCPNTCWEAGKVARDKLKKKIATFEEGVKIRRQEIEHAKVAVTNDEAELLKLKNEEKVLKMLVEQLTERKEQIEKVEEEERLLKEKEEKKRLEREKDETKKIESSETTNVGESKTQEEDNWEKNEAIEHDDKEYKQGEDNDDDKIGNLEDSATDEARVEEEVDSELEAQLPNKPETGAPLLKEVEEDTAVEKDKPLAKSETGESAGTKESSEEVLRKNDASSEELSREELGRLVASRWTGENTEEQSGNVDSTNNSDEESHDILKDTHDDDGYASETDDDHQKYDDDHHRYDDDLEDDLDDDRDENHDDSTSSERYYSDAELDSPDVEAQSNPTWLEKIQKTVRNVLKAVNIFQSPVNQSDAANVRKEYDESTARLSKVQSRISSLSQKLKNDFGPEKEFYSFYDQCFESKQNKYVYKICPYKQASQVEGHSTTRLGRWDKFEDSYRVMIFSSGDTCWNGPDRSLKVKLRCGLKNDVTDVDEPSRCEYMALLSTPAACVEEKLQELKNKLDMLNKEEAEKHDEL 652
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 9235627 9257409 - Tan0019285.1 Tan07g0565 758096
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan07g0565 652 Coils Coil 163 230 - -
Tan07g0565 652 MobiDBLite consensus disorder prediction 307 359 - -
Tan07g0565 652 MobiDBLite consensus disorder prediction 383 418 - -
Tan07g0565 652 Coils Coil 624 651 - -
Tan07g0565 652 MobiDBLite consensus disorder prediction 367 382 - -
Tan07g0565 652 Pfam Glucosidase II beta subunit-like 31 180 IPR028146 -
Tan07g0565 652 Pfam Glucosidase II beta subunit-like protein 494 652 IPR036607 -
Tan07g0565 652 SUPERFAMILY Mannose 6-phosphate receptor domain 533 626 IPR009011 -
Tan07g0565 652 MobiDBLite consensus disorder prediction 217 459 - -
Tan07g0565 652 Gene3D - 528 627 IPR009011 -
Tan07g0565 652 MobiDBLite consensus disorder prediction 419 433 - -
Tan07g0565 652 Gene3D - 84 135 IPR036055 GO:0005515(InterPro)
Tan07g0565 652 PANTHER N-LINKED OLIGOSACCHARIDE PROCESSING 21 635 IPR039794 GO:0006491(PANTHER)|GO:0017177(PANTHER)
Tan07g0565 652 MobiDBLite consensus disorder prediction 434 450 - -
Tan07g0565 652 MobiDBLite consensus disorder prediction 217 281 - -
Tan07g0565 652 CDD LDLa 88 123 IPR002172 GO:0005515(InterPro)
Tan07g0565 652 ProSiteProfiles MRH domain profile. 533 628 IPR044865 -
Tan07g0565 652 Coils Coil 490 510 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan02g0390 Tan-Chr2:3335542 Tan07g0565 Tan-Chr7:9235627 3.00E-28 dispersed
Tan02g0391 Tan-Chr2:3335542 Tan07g0565 Tan-Chr7:9235627 5.80E-23 dispersed
Tan07g0565 Tan-Chr7:9235627 Tan07g0567 Tan-Chr7:9235627 0.00E+00 dispersed
Tan07g0565 Tan-Chr7:9235627 Tan07g0566 Tan-Chr7:9235627 3.1e-313 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan07g0565 K08288 - csv:101221877 1005.36