Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan07g0566 ATGAAGCAATGGGGAGGTCTAAATTCAGAATCCATTGCAACCTTATGGGTATTGTGCACGGCTCTTGCTCTTGCTCCAATTGTTGGATCAGTCTCCTCTCCAAAGCACCAGTTTCGTGGAGTTGCTCCCCAAGATGAGACGTATTACAAGTCGTCGGACATGATCAAATGTAGAGATGGTTCCAACAAATTTTCCAAGGCTCAGCTTAACGATGACTACTGCGATTGCCTTGATGGCACGGACGAACCTGGCACATCCGCATGCCCAAGTGGAAAGTTCTATTGTCGAAATGCAGGGCACGTTCCACTTTTGTTGTTTTCTTCAAGGGTGAACGACGGTATATGTGATTGTTGTGATGGAAGTGACGAATATGACAGCAAAGTCAAATGCCCAAATACGTGCTGGGAAGCCGGGAAAGTGGCAAGAGATAAATTGAAGAAAAAGATTGCAACCTTTGAAGAAGGTGTTAAAATTCGTAGACAAGAAATTGAACATGCAAAAGTTGCTGTAACCAACGATGAGGCTGAGCTATTGAAGTTGAAAAATGAGGAAAAAGTATTAAAAATGCTCGTGGAACAACTCACAGAGCGCAAAGAACAAATAGAGAAGGTAGAAGAGGAGGAGCGATTATTGAAAGAAAAAGAAGAGAAGAAACGTTTGGAGAGAGAAAAAGATGAGACTAAAAAAATTGAGTCATCAGAAACAACTAATGTTGGGGAAAGCAAAACTCAAGAGGAAGACAATTGGGAAAAAAATGAAGCTATAGAACATGATGACAAGGAATATAAACAAGGAGAAGACAATGATGATGATAAAATTGGGAACTTGGAGGACTCTGCCACAGATGAGGCTAGGGTGGAAGAAGAAGTTGACTCAGAACTTGAAGCTCAACTTCCTAATAAACCTGAAACAGGAGCACCATTGCTGAAAGAGGATACAGCAGTAGAGAAAGACAAACCCCTGGCTAAATCTGAAACTGGAGAAAGTGCTGGCACTAAGGAATCATCGGAAGAAGTCCTGAGAAAGCAGAATGATGCTAGTTCAGAGGAGTTGTCACGGGAAGAGTTGGGCCGCCTTGTTGCTTCTCGTTGGACAGGAGAAAATACTGAAGAACAGTCGGGCAACGTGGATAGTACGAACAATAGTGATGAAGAAAGTCATGATATCTTAAAAGACACACATGACGATGACGGTTATGCTTCAGAGACTGATGATGATCACCAAAAATACGATGATGACCACCATAGATACGATGATGACCTAGAGGATGATTTAGATGATGACAGAGATGAAAATCATGATGATTCTACTTCGTCAGAGAGATATTATTCAGATGCAGAATTGGACTCCCCAGATGTGGAAGCCCAAAGTAACCCCACCTGGCTTGAGAAGATACAAAAAACTGTTCGAAATGTCCTCAAAGCTGTAAATATATTCCAGTCTCCAGTGAACCAATCAGATGCTGCGAACGTGCGCAAGGAATATGATGAATCCACTGCCAGGTTGTCAAAAGTACAGTCAAGGATCTCAAGTTTATCACAAAAGCTAAAGAATGATTTTGGTCCAGAGAAGGAGTTCTATTCATTTTATGACCAATGTTTTGAAAGCAAGCAGAACAAATACGTTTACAAAATCTGCCCTTACAAACAAGCTTCACAGGTTGAGGGGCACTCGACAACTCGTTTGGGGCGCTGGGATAAATTTGAGGACTCATATAGGGTTATGATCTTTTCAAGTGGGGATACTTGCTGGAATGGACCTGACAGAAGCTTGAAGGTGAAGCTAAGATGTGGGCTTAAAAATGACGTAACCGATGTAGATGAACCAAGCCGTTGCGAATACATGGCCTTGTTATCAACCCCAGCTGCTTGTGTAGAGGAAAAACTTCAGGAACTGAAAAACAAGTTGGACATGCTGAATAAAGAAGAGGCAGAGAAGCATGATGAACTTTGA 1953 41.94 MKQWGGLNSESIATLWVLCTALALAPIVGSVSSPKHQFRGVAPQDETYYKSSDMIKCRDGSNKFSKAQLNDDYCDCLDGTDEPGTSACPSGKFYCRNAGHVPLLLFSSRVNDGICDCCDGSDEYDSKVKCPNTCWEAGKVARDKLKKKIATFEEGVKIRRQEIEHAKVAVTNDEAELLKLKNEEKVLKMLVEQLTERKEQIEKVEEEERLLKEKEEKKRLEREKDETKKIESSETTNVGESKTQEEDNWEKNEAIEHDDKEYKQGEDNDDDKIGNLEDSATDEARVEEEVDSELEAQLPNKPETGAPLLKEDTAVEKDKPLAKSETGESAGTKESSEEVLRKQNDASSEELSREELGRLVASRWTGENTEEQSGNVDSTNNSDEESHDILKDTHDDDGYASETDDDHQKYDDDHHRYDDDLEDDLDDDRDENHDDSTSSERYYSDAELDSPDVEAQSNPTWLEKIQKTVRNVLKAVNIFQSPVNQSDAANVRKEYDESTARLSKVQSRISSLSQKLKNDFGPEKEFYSFYDQCFESKQNKYVYKICPYKQASQVEGHSTTRLGRWDKFEDSYRVMIFSSGDTCWNGPDRSLKVKLRCGLKNDVTDVDEPSRCEYMALLSTPAACVEEKLQELKNKLDMLNKEEAEKHDEL 650
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 9235627 9257409 - Tan0019285.2 Tan07g0566 758097
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan07g0566 650 Coils Coil 163 230 - -
Tan07g0566 650 SUPERFAMILY Mannose 6-phosphate receptor domain 531 624 IPR009011 -
Tan07g0566 650 Gene3D - 526 625 IPR009011 -
Tan07g0566 650 MobiDBLite consensus disorder prediction 417 431 - -
Tan07g0566 650 Pfam Glucosidase II beta subunit-like 31 180 IPR028146 -
Tan07g0566 650 Pfam Glucosidase II beta subunit-like protein 492 650 IPR036607 -
Tan07g0566 650 ProSiteProfiles MRH domain profile. 531 626 IPR044865 -
Tan07g0566 650 MobiDBLite consensus disorder prediction 432 448 - -
Tan07g0566 650 MobiDBLite consensus disorder prediction 217 457 - -
Tan07g0566 650 MobiDBLite consensus disorder prediction 310 357 - -
Tan07g0566 650 Coils Coil 488 508 - -
Tan07g0566 650 MobiDBLite consensus disorder prediction 381 416 - -
Tan07g0566 650 Coils Coil 622 649 - -
Tan07g0566 650 Gene3D - 84 135 IPR036055 GO:0005515(InterPro)
Tan07g0566 650 MobiDBLite consensus disorder prediction 365 380 - -
Tan07g0566 650 MobiDBLite consensus disorder prediction 217 281 - -
Tan07g0566 650 CDD LDLa 88 123 IPR002172 GO:0005515(InterPro)
Tan07g0566 650 PANTHER N-LINKED OLIGOSACCHARIDE PROCESSING 21 633 IPR039794 GO:0006491(PANTHER)|GO:0017177(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan07g0565 Tan-Chr7:9235627 Tan07g0566 Tan-Chr7:9235627 3.1e-313 tandem
Tan07g0566 Tan-Chr7:9235627 Tan07g0567 Tan-Chr7:9235627 2.2e-313 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan07g0566 K08288 - csv:101221877 989.949