Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan07g0597 ATGGCGACGACTTTGGTCCACTCTCACAGAGCCGAGTTTCTCACCGTCGCCGTCGCCGTGGTTGCCATCGGCGTTGGCACTGCCTGCTATTTCTACATCGTCAAGAAATCCAAAGCCAAAGGTTGCTTGGACCCTGATAATTTCAAGGAATTTAAACTAGTTAAACGCACGCAGCTTAGCCATAATGTGGCGAAGTTCAGATTCTCTCTTCCGACGCCAACCTCTGTCTTGGGGCTGCCAATTGGGCAGCATATGAGTTGCAGAGGAAAAGATAGCCAAGGTGAAGATGTTGTGAAACCGTACACTCCAACCACTTTGGATACAGATGTTGGGTACTTTGATTTGGTCATTAAGATGTATCCACAAGGAAGAATGTCCCACCATTTTCGTGAGATGCGTGAAGGTGATTATTTGGCTGTGAAAGGTCCCAAGGGACGTTTCAAATATGAGCCTAATGAAGTTGAGGCTTTTGGGATGCTTGCTGGAGGCACAGGCATAACTCCTATGTTCCAGGTTACAAGAGCAATACTAGAAAATCCAGTGGACCGTACGAATGTGCATCTTATATATGCTAATGTTACTTATGAAGACATTCTTTTAAAGGAAGAACTGGATACTCTTGCAACTAGATTCCCCTCCCGCTTTACTATCTACTATGTTCTCAATCAGCCTCCTGAAGGATGGGATGGCGGCATTGGCTTTGTGACCGAGGAAATGATACGCCAGCATTGTCCCGCGCCATCCCCTATCGTTCGGATCTTGAGGTGCGGACCACCCCCAATGAACAAAGCTATGGCTACTTACCTCAACAGCATTGGCTATACTTCCCAAATGCAGTTCCAGTTTTGA 849 46.64 MATTLVHSHRAEFLTVAVAVVAIGVGTACYFYIVKKSKAKGCLDPDNFKEFKLVKRTQLSHNVAKFRFSLPTPTSVLGLPIGQHMSCRGKDSQGEDVVKPYTPTTLDTDVGYFDLVIKMYPQGRMSHHFREMREGDYLAVKGPKGRFKYEPNEVEAFGMLAGGTGITPMFQVTRAILENPVDRTNVHLIYANVTYEDILLKEELDTLATRFPSRFTIYYVLNQPPEGWDGGIGFVTEEMIRQHCPAPSPIVRILRCGPPPMNKAMATYLNSIGYTSQMQFQF 282
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 9534302 9537587 + Tan0017713.1 Tan07g0597 758128

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Tan07g0597 282 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 252 260 IPR001709 GO:0016491(InterPro)
Tan07g0597 282 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 158 177 IPR001709 GO:0016491(InterPro)
Tan07g0597 282 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 196 207 IPR001709 GO:0016491(InterPro)
Tan07g0597 282 CDD cyt_b5_reduct_like 51 282 - -
Tan07g0597 282 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 138 276 IPR039261 -
Tan07g0597 282 Gene3D Translation factors 41 139 - -
Tan07g0597 282 FunFam NADH-cytochrome b5 reductase 41 140 - -
Tan07g0597 282 Pfam Oxidoreductase NAD-binding domain 159 265 IPR001433 GO:0016491(InterPro)
Tan07g0597 282 Pfam Oxidoreductase FAD-binding domain 51 149 IPR008333 -
Tan07g0597 282 Gene3D - 140 282 IPR039261 -
Tan07g0597 282 SUPERFAMILY Riboflavin synthase domain-like 42 152 IPR017938 -
Tan07g0597 282 FunFam NADH-cytochrome b5 reductase 140 282 - -
Tan07g0597 282 PRINTS Cytochrome B5 reductase signature 158 177 - -
Tan07g0597 282 PRINTS Cytochrome B5 reductase signature 77 88 - -
Tan07g0597 282 PRINTS Cytochrome B5 reductase signature 135 149 - -
Tan07g0597 282 PRINTS Cytochrome B5 reductase signature 99 106 - -
Tan07g0597 282 PRINTS Cytochrome B5 reductase signature 196 207 - -
Tan07g0597 282 PRINTS Cytochrome B5 reductase signature 252 260 - -
Tan07g0597 282 PANTHER NADH-CYTOCHROME B5 REDUCTASE 18 282 IPR001834 GO:0004128(PANTHER)|GO:0016491(InterPro)|GO:0022900(PANTHER)
Tan07g0597 282 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 46 150 IPR017927 GO:0016491(InterPro)
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan07g0597 K00326 - - csv:101219272 519.235
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan07g0597 Tan-Chr7:9534302 Tan08g1334 Tan-Chr8:51426404 2.70E-117 dispersed
Tan07g0597 Tan-Chr7:9534302 Tan11g1335 Tan-Chr11:11537175 1.20E-43 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi6g897 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Sed05g1022 . . . . . . Cpe16g00938 . Bhi10g00465 Tan07g0597 Cmetu05g0368 . . . . . . . . . . . . . . .
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Tan07g0521 . 1 134 NADPH P450 reductases AT5G53560 79.1 2.7e-59 225.3
Tan10g0527 . 1 133 NADPH P450 reductases AT5G53560 67.7 2.7e-51 198.7
Tan06g2314 . 1 133 NADPH P450 reductases AT5G53560 64.7 1.7e-48 189.5
Tan07g0522 . 2 112 NADPH P450 reductases AT5G53560 76.6 2.9e-45 178.7
Tan07g2098 . 4 131 NADPH P450 reductases AT5G53560 64.8 3.8e-45 178.3
Tan10g0527 . 1 132 NADPH P450 reductases AT5G48810 64.2 1.5e-47 186.4
Tan06g2314 . 1 133 NADPH P450 reductases AT5G48810 60.0 2.8e-46 182.2
Tan07g0521 . 1 134 NADPH P450 reductases AT5G48810 60.3 1.8e-45 179.5
Tan07g2098 . 2 132 NADPH P450 reductases AT5G48810 60.9 1.2e-44 176.8
Tan10g0077 . 226 362 NADPH P450 reductases AT5G48810 51.8 2.3e-37 152.5
Tan10g0527 . 22 133 NADPH P450 reductases AT2G32720 83.9 1.4e-50 196.4
Tan06g2314 . 22 133 NADPH P450 reductases AT2G32720 75.0 1.0e-45 180.3
Tan07g2098 . 21 132 NADPH P450 reductases AT2G32720 71.4 6.7e-42 167.5
Tan07g0521 . 22 133 NADPH P450 reductases AT2G32720 67.0 1.7e-40 162.9
Tan07g0522 . 4 111 NADPH P450 reductases AT2G32720 68.5 1.1e-39 160.2
Tan02g2283 . 1 130 NADPH P450 reductases AT1G26340 58.2 5.4e-39 157.9
Tan03g0549 . 2 281 NADPH P450 reductases AT5G17770 81.1 5.0e-132 468.0
Tan08g1334 . 2 280 NADPH P450 reductases AT5G17770 80.3 1.2e-130 463.4
Tan08g1335 . 8 248 NADPH P450 reductases AT5G17770 86.3 5.6e-123 438.0
Tan07g0597 . 10 282 NADPH P450 reductases AT5G17770 73.3 7.1e-118 421.0
Tan08g1336 . 3 197 NADPH P450 reductases AT5G17770 87.7 6.6e-100 361.3
Tan08g1337 . 3 197 NADPH P450 reductases AT5G17770 87.7 6.6e-100 361.3
Tan03g0550 . 2 200 NADPH P450 reductases AT5G17770 80.4 2.0e-88 323.2
Tan07g0521 . 1 134 NADPH P450 reductases AT5G53560 79.1 2.7e-59 225.3
Tan10g0527 . 1 133 NADPH P450 reductases AT5G53560 67.7 2.7e-51 198.7
Tan06g2314 . 1 133 NADPH P450 reductases AT5G53560 64.7 1.7e-48 189.5
Tan07g0522 . 2 112 NADPH P450 reductases AT5G53560 76.6 2.9e-45 178.7
Tan07g2098 . 4 131 NADPH P450 reductases AT5G53560 64.8 3.8e-45 178.3
Tan10g0527 . 1 132 NADPH P450 reductases AT5G48810 64.2 1.5e-47 186.4
Tan06g2314 . 1 133 NADPH P450 reductases AT5G48810 60.0 2.8e-46 182.2
Tan07g0521 . 1 134 NADPH P450 reductases AT5G48810 60.3 1.8e-45 179.5
Tan07g2098 . 2 132 NADPH P450 reductases AT5G48810 60.9 1.2e-44 176.8
Tan10g0077 . 226 362 NADPH P450 reductases AT5G48810 51.8 2.3e-37 152.5
Tan10g0527 . 22 133 NADPH P450 reductases AT2G32720 83.9 1.4e-50 196.4
Tan06g2314 . 22 133 NADPH P450 reductases AT2G32720 75.0 1.0e-45 180.3
Tan07g2098 . 21 132 NADPH P450 reductases AT2G32720 71.4 6.7e-42 167.5
Tan07g0521 . 22 133 NADPH P450 reductases AT2G32720 67.0 1.7e-40 162.9
Tan07g0522 . 4 111 NADPH P450 reductases AT2G32720 68.5 1.1e-39 160.2
Tan02g2283 . 1 130 NADPH P450 reductases AT1G26340 58.2 5.4e-39 157.9
Tan03g0549 . 2 281 NADPH P450 reductases AT5G17770 81.1 5.0e-132 468.0
Tan08g1334 . 2 280 NADPH P450 reductases AT5G17770 80.3 1.2e-130 463.4
Tan08g1335 . 8 248 NADPH P450 reductases AT5G17770 86.3 5.6e-123 438.0
Tan07g0597 . 10 282 NADPH P450 reductases AT5G17770 73.3 7.1e-118 421.0
Tan08g1336 . 3 197 NADPH P450 reductases AT5G17770 87.7 6.6e-100 361.3
Tan08g1337 . 3 197 NADPH P450 reductases AT5G17770 87.7 6.6e-100 361.3
Tan03g0550 . 2 200 NADPH P450 reductases AT5G17770 80.4 2.0e-88 323.2
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000880 3 3 2 3 3 2 4 3 2 3 3 3 4 3 3 4 3 4 4 2 3 2 2 3 2 1 1 3 5 3 86