Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan07g0613 ATGGCTTTAACAGCCCCAGGGCAGCTTAACGTTAATGAGTCCCCTTCGTGGGGATCTAGAAGTGTCGACTGCTTTGAAAAACTGGAGCAGATTGGTGAAGGCACTTATGGTCAGGTTTACATGGCCCGCGAATTAAAAACAGGTGAAATTGTTGCACTGAAGAAAATACGAATGGATAACGAGAGGGAAGGGTTCCCTATTACTGCCATACGAGAAATCAAAATTCTAAAGAAGCTCCATCATGAAAATGTAATCAAGTTGAAAGAGATTGTGACATCTCCAGGGCCTGAGAAGGATGAACAAGGGAAGCCAGATGGTAACAAGTACAAAGGTGGCATCTACATGGTTTTCGAGTACATGGACCATGATTTGACAGGCCTTGCTGATCGTCCAGGGATGAGGTTTTCAGTTCCCCAAATCAAGTGCTACATGAGGCAGCTTCTCACAGGGCTTCACTATTGTCATGTAAATCAAGTGCTGCATAGAGATATAAAAGGCTCAAATCTGCTTATTGACAATGAAGGAAATCTGAAGCTTGCAGATTTTGGGCTTGCCCGATCATTTTCTAATGATCACAATGCAAATCTAACAAATCGTGTCATTACCTTATGGTACAGACCTCCTGAATTGCTGCTCGGGTCGACAAAATATGGTCCAGCTGTAGACATGTGGTCTGTTGGTTGTATTTTTGCAGAGCTTCTACATGGGAAGCCGATATTCCCTGGCAAGGATGAGCCGGAGCAATTAAATAAGATCTTTGAGCTATGTGGTGCTCCGGATGAAGTCAATTGGCCTGGGGTTTCTAAAATCCCTTGGTACAACAATTTCAAGCCAACAAGACCGATGAAGAGACGTCTTAGAGAAGTTTTCAGGCATTTCGATCGTCATGCTTTAGAACTGTTGGAGAAGATGCTAACTCTCGATCCTTCTCAGAGGATATCTGCCAAGGATGCCCTAGATGCGGAATATTTTTGGACAGATCCATTACCTTGTGACCCTAAAAGTTTACCAAAGTATGAAGCGTCACACGAGTTCCAGACAAAGAAGAAGCGCCAACAGCAACGACAACATGAAGAAACTGCAAAGCGACAGAAGTTGCAACACCCGCAGCATGCACGCCTTCCACCTATTCAGCAGTCGGGGCAAGTACACGCACAAATGCGACCGGTACCAAACCAACCTATTCACGGGTCTCAGCCACCAGTTGCTGCAGGTCCTAGCCACCATTTTGGGAAACCTCGTGGACCTCCAGGTCCTGGTAGATATCCCTCTGGTGGAAATCCGCCTTCTGGATACAACCACCCAAGTCGTGGTGGTCAAGGTGGGGGCAATTATGGTAACGCCCAATATGCTCAAGGACGAGGTGCACCCTATGGGTCTGGTAACATGTCTGGTGCTGGTCCGCGAGGTGGAGCTGGAGGTGGCAGCGGTTATGGCGTGGGAGCTCCAAATTATCCACAGAATGGTCCATATGCTGGTAGTTCTGGTACTGGCCGTGGCTCTAATGTGATGGGTGGAAACCGAAACCAACAATATGGGTGGCAACAATGA 1551 46.94 MALTAPGQLNVNESPSWGSRSVDCFEKLEQIGEGTYGQVYMARELKTGEIVALKKIRMDNEREGFPITAIREIKILKKLHHENVIKLKEIVTSPGPEKDEQGKPDGNKYKGGIYMVFEYMDHDLTGLADRPGMRFSVPQIKCYMRQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSNDHNANLTNRVITLWYRPPELLLGSTKYGPAVDMWSVGCIFAELLHGKPIFPGKDEPEQLNKIFELCGAPDEVNWPGVSKIPWYNNFKPTRPMKRRLREVFRHFDRHALELLEKMLTLDPSQRISAKDALDAEYFWTDPLPCDPKSLPKYEASHEFQTKKKRQQQRQHEETAKRQKLQHPQHARLPPIQQSGQVHAQMRPVPNQPIHGSQPPVAAGPSHHFGKPRGPPGPGRYPSGGNPPSGYNHPSRGGQGGGNYGNAQYAQGRGAPYGSGNMSGAGPRGGAGGGSGYGVGAPNYPQNGPYAGSSGTGRGSNVMGGNRNQQYGWQQ 516
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 9661317 9668469 + Tan0017699.1 Tan07g0613 758144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan07g0613 516 ProSiteProfiles Protein kinase domain profile. 25 324 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan07g0613 516 MobiDBLite consensus disorder prediction 335 516 - -
Tan07g0613 516 MobiDBLite consensus disorder prediction 488 516 - -
Tan07g0613 516 PANTHER CELL DIVISION PROTEIN KINASE 25 324 IPR050108 GO:0000307(PANTHER)|GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0006468(PANTHER)|GO:0008353(PANTHER)|GO:0032968(PANTHER)|GO:0070816(PANTHER)
Tan07g0613 516 ProSitePatterns Protein kinases ATP-binding region signature. 31 54 IPR017441 GO:0005524(InterPro)
Tan07g0613 516 Pfam Protein kinase domain 25 324 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan07g0613 516 FunFam Cyclin-dependent kinase C-2 122 364 - -
Tan07g0613 516 MobiDBLite consensus disorder prediction 337 366 - -
Tan07g0613 516 SMART serkin_6 25 324 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan07g0613 516 MobiDBLite consensus disorder prediction 373 387 - -
Tan07g0613 516 SUPERFAMILY Protein kinase-like (PK-like) 19 332 IPR011009 -
Tan07g0613 516 CDD STKc_CDK9_like 25 324 - -
Tan07g0613 516 ProSitePatterns Serine/Threonine protein kinases active-site signature. 159 171 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan07g0613 516 FunFam Cyclin-dependent kinase C-2 12 121 - -
Tan07g0613 516 Gene3D Transferase(Phosphotransferase) domain 1 122 364 - -
Tan07g0613 516 Gene3D Phosphorylase Kinase; domain 1 12 121 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan04g0087 Tan-Chr4:630286 Tan07g0613 Tan-Chr7:9661317 1.20E-76 dispersed
Tan04g0088 Tan-Chr4:630286 Tan07g0613 Tan-Chr7:9661317 1.20E-76 dispersed
Tan07g0613 Tan-Chr7:9661317 Tan11g0964 Tan-Chr11:7749317 1.80E-276 dispersed
Tan09g1834 Tan-Chr9:69723447 Tan07g0613 Tan-Chr7:9661317 3.10E-45 dispersed
Tan07g0613 Tan-Chr7:9661317 Tan07g0614 Tan-Chr7:9661317 3.60E-261 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67844 PF00069 Pkinase 4.20E-75 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan07g0613 K08819 - csv:101220936 963.37