Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan07g0621 ATGAGAAGATCAGGTGTAAACCAACCAAAAGTCAAGCGTCTTGTTGGAAAATATGAAATTGGTCGAACAATTGGTGAGGGCACATTTGCAAAAGTGAAATTTGCCAAGAATTCTGAGACTGGGGAACATGTAGCAATAAAGATCCTTGACAAAGAGAAAGTTCTGAAGCACAAGATGGCTGAACAGATCAAGCGGGAAATAGCCACAATGAAACTAATAAAGCATCCACACGTGGTCCAATTGTTTGAGGTGATGGGGAGCAAAACAAAGATATTTATTGTTTTGGAGTTTGTTACTGGAGGAGAACTTTTTGATAAAATTGTAAATCATGGGCGGATGAGTGAAACTGAGGCACGGAGATATTTTCAGCAACTTATAAATGCTGTTGATTATTGTCATAGCAGGGGTGTTTACCACAGGGATCTTAAGCCAGAAAATCTATTGTTAGATGCCTACGGAAATCTTAAAGTGTCTGATTTTGGATTGAGTGCACTGTCACAACAAGTTAAGGATGATGGCCTGCTTCACACTACTTGTGGAACTCCAAACTACGTTGCTCCTGAGGTCCTTAATGATAGAGGCTACGATGGCGCAACTGCAGACTTATGGTCTTGTGGAGTCATACTCTTTGTACTGCTTGCAGGTTACTTGCCTTTTGATGATTCTAATATCATAAACCTTTATAAAAAGATCTCGGCTGCCGAATTTACTTGTCCTCCATGGCTTTCTTTAGATGCCATGAAATTGATAACTCGAATTTTGGATCCCAACCCAATGACTCGCATCACTGTACCAGAAATTTTGGAAGATGAATGGTTTAAGAAAAATTATAAGCCCCCGGTTTTTGAGGAGCATAAGATTGCAAACTTGGATGATGTAGAAGCAGTCTTCAAAGATTCGGAAGAGCACCATGTGACAGAGAAGAAGGAAGAACAGCCAGTAGCCATGAATGCCTTCGAGTTAATTTCCATGTCAAAAGGGCTCAACCTGGCAAATTTGTTTGGTACAGAACAGGTTTGCATTTTTCCAATCATAAACATTGAATATTGTTTGTCTCAGTTGCTACTGTTGTGTCCCAGCTTAAATTGA 1089 39.85 MRRSGVNQPKVKRLVGKYEIGRTIGEGTFAKVKFAKNSETGEHVAIKILDKEKVLKHKMAEQIKREIATMKLIKHPHVVQLFEVMGSKTKIFIVLEFVTGGELFDKIVNHGRMSETEARRYFQQLINAVDYCHSRGVYHRDLKPENLLLDAYGNLKVSDFGLSALSQQVKDDGLLHTTCGTPNYVAPEVLNDRGYDGATADLWSCGVILFVLLAGYLPFDDSNIINLYKKISAAEFTCPPWLSLDAMKLITRILDPNPMTRITVPEILEDEWFKKNYKPPVFEEHKIANLDDVEAVFKDSEEHHVTEKKEEQPVAMNAFELISMSKGLNLANLFGTEQVCIFPIINIEYCLSQLLLLCPSLN 362
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 9677975 9687555 - Tan0004178.5 Tan07g0621 758152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan07g0621 362 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 10 338 - GO:0004674(PANTHER)|GO:0006468(PANTHER)|GO:0007165(PANTHER)
Tan07g0621 362 CDD STKc_SnRK3 17 272 - -
Tan07g0621 362 ProSitePatterns Serine/Threonine protein kinases active-site signature. 137 149 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan07g0621 362 Gene3D Transferase(Phosphotransferase) domain 1 8 332 - -
Tan07g0621 362 SMART serkin_6 18 273 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan07g0621 362 ProSitePatterns Protein kinases ATP-binding region signature. 24 47 IPR017441 GO:0005524(InterPro)
Tan07g0621 362 FunFam Non-specific serine/threonine protein kinase 11 313 - -
Tan07g0621 362 FunFam Non-specific serine/threonine protein kinase 9 97 - -
Tan07g0621 362 SUPERFAMILY Protein kinase-like (PK-like) 14 296 IPR011009 -
Tan07g0621 362 ProSiteProfiles Protein kinase domain profile. 18 273 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan07g0621 362 Pfam Protein kinase domain 18 273 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan07g0621 362 ProSiteProfiles NAF domain profile. 311 335 IPR018451 GO:0007165(InterPro)
Tan07g0621 362 Pfam NAF domain 313 337 IPR004041 GO:0007165(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan07g0619 Tan-Chr7:9675988 Tan07g0621 Tan-Chr7:9677975 1.50E-194 dispersed
Tan07g0621 Tan-Chr7:9677975 Tan10g0068 Tan-Chr10:1022351 6.90E-134 dispersed
Tan07g0620 Tan-Chr7:9675988 Tan07g0621 Tan-Chr7:9677975 1.50E-194 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67852 PF00069 Pkinase 1.20E-72 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan07g0621 - - - 0.0