Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan07g0676 ATGGCTTCCCCTAAACTCGCAGGCTTTGCCTTTGTTGTTTTGGCGGCGTTGATGCTAGGCAGCTCTCACGCCCATCTTACCCCTTTCTACTATTCCTACGCATGCCCTCGGCTCCCTATCATTGTTGGAGATGTGGTTGCACGAGCTCTACAAACTGACGACCGAGCAGCTGCCAAGCTCATTCGCCTCCATTTCCACGACTGTTTCGTCAATGGGTGTGATGGGTCGGTGTTATTGGAGGACGTACCGGGCGTCATTGACAGTGAATTAAATGGACCTCCAAACAATGGGATTCAAGGGCTGGACATCGTGGACAACATCAAAGCCGCAGTTGAACGCTCTTGCCCAGGCGTTGTTTCCTGCGCTGACATCTTAGCCATTTCGTCTCAAATCTCTGTTTTCTTGTCGGGAGGGCCAATGTGGGTAGTTCCATTGGGAAGAAAAGACAGCCGGATAGCCAATAGAACCGGAACCTCAAATCTTCCCGGTCCGTCAGAAACTCTTAACGGACTTAAATCCAAGTTCGGGGCTCTTGGGCTTGATTCTACGGATCTTGTGGCTCTATCAGGAGCACACACGTTCGGGAAAGCCAGATGCTTTTTCTTCACTGGACGCTTTGACAACTTCAACAACACAGGCAGACCCGACCCGACGCTTGACCCGGCTTACAGGGAGCTGCTTCGACGACTCTGTACTACCCCACAAACAAGAGTGAATTTCGATCCTACCACACCAACCAAATTCGACAAAGCTTATTACAATAATCTTGTTAGCCTAAAGGGTCTTCTCCAAAGTGACCAAGAGCTCTTCTCCACGCCCAGGGCTGATACCACTGCCATCGTCAGAAATTTCGCTGCCAACGAGCTTGCCTTCTTTAACCAATTTGTGAAATCCATGATCAAAATGGGCAATCTCAAGCCTCCCTCCGGCATCAAATCAGAAGTCAGATTAAACTGTAGAAGAGTCAATCCAGTGAAGGCCTATGACGTTATGTAA 996 49.4 MASPKLAGFAFVVLAALMLGSSHAHLTPFYYSYACPRLPIIVGDVVARALQTDDRAAAKLIRLHFHDCFVNGCDGSVLLEDVPGVIDSELNGPPNNGIQGLDIVDNIKAAVERSCPGVVSCADILAISSQISVFLSGGPMWVVPLGRKDSRIANRTGTSNLPGPSETLNGLKSKFGALGLDSTDLVALSGAHTFGKARCFFFTGRFDNFNNTGRPDPTLDPAYRELLRRLCTTPQTRVNFDPTTPTKFDKAYYNNLVSLKGLLQSDQELFSTPRADTTAIVRNFAANELAFFNQFVKSMIKMGNLKPPSGIKSEVRLNCRRVNPVKAYDVM 331
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 10579857 10581206 - Tan0001781.1 Tan07g0676 758207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan07g0676 331 PANTHER PEROXIDASE 72-RELATED 13 322 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan07g0676 331 Gene3D Peroxidase, domain 2 162 302 - -
Tan07g0676 331 CDD secretory_peroxidase 25 322 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Tan07g0676 331 FunFam Peroxidase 162 302 - -
Tan07g0676 331 PRINTS Haem peroxidase superfamily signature 137 149 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan07g0676 331 PRINTS Haem peroxidase superfamily signature 241 256 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan07g0676 331 PRINTS Haem peroxidase superfamily signature 57 71 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan07g0676 331 PRINTS Haem peroxidase superfamily signature 119 136 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan07g0676 331 PRINTS Haem peroxidase superfamily signature 184 199 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan07g0676 331 ProSiteProfiles Plant heme peroxidase family profile. 25 323 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan07g0676 331 Pfam Peroxidase 44 287 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan07g0676 331 ProSitePatterns Peroxidases active site signature. 57 68 IPR019794 GO:0004601(InterPro)
Tan07g0676 331 PRINTS Plant peroxidase signature 59 79 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan07g0676 331 PRINTS Plant peroxidase signature 183 195 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan07g0676 331 PRINTS Plant peroxidase signature 137 152 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan07g0676 331 PRINTS Plant peroxidase signature 255 272 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan07g0676 331 PRINTS Plant peroxidase signature 118 128 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan07g0676 331 PRINTS Plant peroxidase signature 99 112 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan07g0676 331 PRINTS Plant peroxidase signature 35 54 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan07g0676 331 PRINTS Plant peroxidase signature 297 310 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan07g0676 331 PRINTS Plant peroxidase signature 239 254 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan07g0676 331 SUPERFAMILY Heme-dependent peroxidases 26 324 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan07g0676 331 ProSitePatterns Peroxidases proximal heme-ligand signature. 184 194 IPR019793 -
Tan07g0676 331 Gene3D - 30 323 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan07g0676 Tan-Chr7:10579857 Tan07g0678 Tan-Chr7:10625637 6.30E-142 dispersed
Tan07g0675 Tan-Chr7:10528532 Tan07g0676 Tan-Chr7:10579857 4.50E-164 tandem
Tan07g0676 Tan-Chr7:10579857 Tan07g0677 Tan-Chr7:10579857 1.10E-149 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan07g0676 K00430 - csv:101211989 542.732