Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan07g0683 ATGCTGTCGTTTAAAGTTGCCGCTTTAGTTATCTTCGTGTGTATGATGTTGGGGAGTTCTTGGGCTCAACTCACCCCTACCTTCTACGACCAAACATGCCCTAATCTATCCACCATCGTCAGTGATGCAGTAAGCCAGGCATTGCAGGGGGATGTTCGAGCTGGAGCCAAGCTCATTCGCTTTCACTTCCACGACTGCTTCGTCAATGGCTGTGATGGATCGGTTCTACTAGAAGATGCTGAAGGTATCGATAGCGAACTAAATGCTCCTGGGAACCAAGGAATACAAGGGATCGACATTGTCGACAACATCAAAGCTGCGGTCGAAGCTGCCTGCCCGTCTACCGTGTCTTGTGCCGATATCTTAGCCATTGCATCTCGTGAATCTGTCATCTTGACGGGAGGACCGAGTTGGGAAGTTCAATTGGGAAGAAGAGATAGCAGAGAAGCAAATAGAACTGGAGCTGAATCCAACCTCCCTAGCCCATTTGAAACACTTCCCCAACTTCAAGCCAAATTTACCGCACTTGGCCTCGATTCTACCGATCTTGTCACTCTATCTGGAGCGCATACATTCGGTAGGTCAAGATGCTTATTCTTCAGCAGGCGGCTAACCAATTTCAACGGCACAGGAAGTCCAGACCCAACTCTAGACCCCACATTCCGAGATGCACTGGTCATCGCTTGTCCCACCGGCGACCAAAACAACCGTATCGCACTGGACGTGACGACGCCGGACGACTTCGACAATGCATATTACACCGATCTGGTCACCAATCGTGGGCTTCTCCAGTCCGATCAAGAGCTCTTCTCCACCGACGGGGCGGAAACCATAGCTACCGTAAATCGTTTTGCAAGCAGTCAGGCTGATTTCTTTGCTCAGTTTGGTCAGTCTATGATTAACATGGGCAACATTCAACCTTTAATTGCACCCGCCGGGGAAATTAGGTTGAATTGTAGGCGCGTTAATCCCTTGCAGACTACTGCTGTTATGTAA 996 49.5 MLSFKVAALVIFVCMMLGSSWAQLTPTFYDQTCPNLSTIVSDAVSQALQGDVRAGAKLIRFHFHDCFVNGCDGSVLLEDAEGIDSELNAPGNQGIQGIDIVDNIKAAVEAACPSTVSCADILAIASRESVILTGGPSWEVQLGRRDSREANRTGAESNLPSPFETLPQLQAKFTALGLDSTDLVTLSGAHTFGRSRCLFFSRRLTNFNGTGSPDPTLDPTFRDALVIACPTGDQNNRIALDVTTPDDFDNAYYTDLVTNRGLLQSDQELFSTDGAETIATVNRFASSQADFFAQFGQSMINMGNIQPLIAPAGEIRLNCRRVNPLQTTAVM 331
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 10748420 10749892 - Tan0016781.1 Tan07g0683 758214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan07g0683 331 Gene3D - 28 323 - -
Tan07g0683 331 PANTHER PEROXIDASE 72-RELATED 11 322 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan07g0683 331 Gene3D Peroxidase, domain 2 160 302 - -
Tan07g0683 331 CDD secretory_peroxidase 23 322 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Tan07g0683 331 FunFam Peroxidase 160 302 - -
Tan07g0683 331 PRINTS Plant peroxidase signature 33 52 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan07g0683 331 PRINTS Plant peroxidase signature 57 77 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan07g0683 331 PRINTS Plant peroxidase signature 297 310 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan07g0683 331 PRINTS Plant peroxidase signature 96 109 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan07g0683 331 PRINTS Plant peroxidase signature 181 193 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan07g0683 331 PRINTS Plant peroxidase signature 134 149 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan07g0683 331 PRINTS Plant peroxidase signature 255 272 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan07g0683 331 PRINTS Plant peroxidase signature 115 125 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan07g0683 331 PRINTS Plant peroxidase signature 239 254 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan07g0683 331 ProSiteProfiles Plant heme peroxidase family profile. 23 323 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan07g0683 331 MobiDBLite consensus disorder prediction 143 163 - -
Tan07g0683 331 PRINTS Haem peroxidase superfamily signature 241 256 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan07g0683 331 PRINTS Haem peroxidase superfamily signature 182 197 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan07g0683 331 PRINTS Haem peroxidase superfamily signature 134 146 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan07g0683 331 PRINTS Haem peroxidase superfamily signature 55 69 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan07g0683 331 PRINTS Haem peroxidase superfamily signature 116 133 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan07g0683 331 Pfam Peroxidase 40 286 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan07g0683 331 FunFam Peroxidase 27 172 - -
Tan07g0683 331 ProSitePatterns Peroxidases proximal heme-ligand signature. 182 192 IPR019793 -
Tan07g0683 331 SUPERFAMILY Heme-dependent peroxidases 23 324 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan07g0204 Tan-Chr7:4640087 Tan07g0683 Tan-Chr7:10748420 5.20E-112 dispersed
Tan07g0683 Tan-Chr7:10748420 Tan07g0685 Tan-Chr7:10797187 2.30E-83 dispersed
Tan07g0681 Tan-Chr7:10702404 Tan07g0683 Tan-Chr7:10748420 3.30E-122 proximal
Tan07g0683 Tan-Chr7:10748420 Tan07g0684 Tan-Chr7:10748420 9.30E-170 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan07g0683 K00430 - csv:101217743 550.436