Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan07g0730 ATGGATCCGGCTCAGCCATCCACACCAGAGCTCCATCTTCACAATCTCAGACCCCTCAAGGTACTCGGCAAAGGAGCCATGGGGACCGTCTTCCTCGTTCACGACCACCTTGCCGATGAGCCTGCTAATTTCCCATTCGCTCTCAAGGTCGTCGAGAAATCCTCTTTCCTCTCTAAGCTTGACGCCGAGCGGCGAGCTCGTTGGGAGATTCAGGTTCTTTCCCGCTTTTCACTTCCTAAACCGCACCCCTTTCTTCCTGACATTATCGGCTCCTTCGAGTCCGACGAGTTTTTAGGCTGGGCCGTTCCGTACTGTCCCGGAGGCGACCTTAACGTCTTGCGTTACCGCCAGATGGACCGGGTTTTTTCTCCGTCCGTCATTCGGTTCTATTTGGCCGAGATCATCTGTGCGCTCGAGCATCTTCATAGCATGGGCATCGTCTACCGAGATTTGAAGCCGGAGAATGTATTGATTCAACAATCGGGTCACGTCACTCTTACGGATTTTGATTTGTCGCGTAATTTGACTCGCAGAACAGTAAAAGATGTCGTTTCGCTTGATAATTCCGGCCACGAGAAGCCGCCGGTCGTCGTCCGGAAAAATCACCGGCGGAACTTGACGCGATGGATCATGGCGACCTCTAACGTTAAAAACGGTTTGAGAAAGGCTAAATCAGCTCGGGTCAGCCCTGTGAGCCGCCGGAAGTCGAGTTTTACCAATAATGGCGAGCGGTCGAACTCGTTCGTCGGAACAGAGGAGTACGTTGCCCCGGAGGTCGTTCGAGGCGACGGACATGAATTCGCTGTCGACTGGTGGGCCTTGGGAATTCTCACGTACGAGATGCTTTACGGGACGACGCCGTTTAAGGGGAAGAACCGGAAAGAGACGTTTCGTAACGTTCTGGTCAAAGCCCCGGAGTTGATCGGAAAGCGTTCGGATTTAACGGATTTGATCGAACGCTTGCTGGTGAAGGACCCCACCAGACGGTTGGGGTACGTACGAGGCGCGTGTGAGATCAAAGAGCATGCGTTTTTTAACGGCGTTAAGTGGGACCTATTAACGGAGGTCACGCGACCGCCATTTTTACCGCCTCGTGAAGAAACGGAATGGACGGAGAATTTAACGCTCGGTGGTGTTGGTATAGCGGAATACTTTCACAGACAGAGATCGCCGCCTTCGTTTCCACCGTCGCCGTCGTCGTCTCCGTCGACGTCCTTCCGTTGGCAGGATAACAACATGTCTTTAACAGAGTTCTGA 1257 53.14 MDPAQPSTPELHLHNLRPLKVLGKGAMGTVFLVHDHLADEPANFPFALKVVEKSSFLSKLDAERRARWEIQVLSRFSLPKPHPFLPDIIGSFESDEFLGWAVPYCPGGDLNVLRYRQMDRVFSPSVIRFYLAEIICALEHLHSMGIVYRDLKPENVLIQQSGHVTLTDFDLSRNLTRRTVKDVVSLDNSGHEKPPVVVRKNHRRNLTRWIMATSNVKNGLRKAKSARVSPVSRRKSSFTNNGERSNSFVGTEEYVAPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFKGKNRKETFRNVLVKAPELIGKRSDLTDLIERLLVKDPTRRLGYVRGACEIKEHAFFNGVKWDLLTEVTRPPFLPPREETEWTENLTLGGVGIAEYFHRQRSPPSFPPSPSSSPSTSFRWQDNNMSLTEF 418
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 11679552 11681037 - Tan0016385.1 Tan07g0730 758261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan07g0730 418 SMART serkin_6 16 345 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan07g0730 418 Gene3D Phosphorylase Kinase; domain 1 17 108 - -
Tan07g0730 418 Pfam Protein kinase domain 19 183 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan07g0730 418 Pfam Protein kinase domain 238 345 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan07g0730 418 ProSitePatterns Serine/Threonine protein kinases active-site signature. 146 158 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan07g0730 418 ProSiteProfiles Protein kinase domain profile. 16 345 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan07g0730 418 Gene3D Transferase(Phosphotransferase) domain 1 109 178 - -
Tan07g0730 418 FunFam Serine/threonine-protein kinase UCNL 16 108 - -
Tan07g0730 418 PANTHER FLIPPASE KINASE 1-RELATED 10 366 - GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER)
Tan07g0730 418 ProSitePatterns Protein kinases ATP-binding region signature. 22 49 IPR017441 GO:0005524(InterPro)
Tan07g0730 418 MobiDBLite consensus disorder prediction 400 418 - -
Tan07g0730 418 MobiDBLite consensus disorder prediction 387 418 - -
Tan07g0730 418 Gene3D Transferase(Phosphotransferase) domain 1 240 364 - -
Tan07g0730 418 FunFam Serine/threonine-protein kinase OXI1 243 364 - -
Tan07g0730 418 FunFam Serine/threonine-protein kinase OXI1 109 177 - -
Tan07g0730 418 SUPERFAMILY Protein kinase-like (PK-like) 14 409 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan06g1215 Tan-Chr6:12967454 Tan07g0730 Tan-Chr7:11679552 2.30E-75 dispersed
Tan07g0730 Tan-Chr7:11679552 Tan10g0017 Tan-Chr10:455220 8.10E-62 dispersed
Tan07g0730 Tan-Chr7:11679552 Tan05g0142 Tan-Chr5:1118756 2.20E-67 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67856 PF00069 Pkinase 8.10E-30 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan07g0730 - - - 0.0