Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan07g0731 ATGGGGTCAATGAATTCAAATTCAAACAATTGGCTTTCATTTCCACTATCACCCACCAATCCTTCTTTACCACCACATCTTCAAACAACAACTCATCAATCCCATCACTTCTCTTTGGGTAATTTGGAGAATGATAATATGGAAATCCCATTTCAAACTCATGAGTGGAATCTGATAAGTAGTCAAGGCGGTGGTGAAGTTCCAAAAGTTGCAGACTTTTTAGGCATAAGCAAGGCAGAAAATGAGGCAGATCTCATTGGGTTTAATGAAATTCATCAGGGTAATGATACTGATAATTACTTGTTTCCAATCGCAAGATTGGTGCCTGTTCAACAAGCCACACTGACACCATCAATAACTGTGGACTCTACTACTAACTATGATCACCTTCAAGACAATTCAAATAGTTTGCAATCTTTGACCCTTTCCATGGGCAGTGGCAAGGCTTCTACTTGTGAAGCCACCCCTGATAATAATACCTCCAATGCCGCCACTGTTGATGTCACTCCGAGAAGAACTTTGGACACTTTTGGCCAAAGAACTTCCATTTATCGCGGTGTCACTCGGCATCGATGGACGGGAAGATATGAAGCACATTTGTGGGATAATAGTTGCAGGAGGGAAGGGCAGTCAAGGAAGGGTCGCCAAGGTGGGTATGATAAAGAAGAGAAAGCTGCGAGGGCTTATGATCTTGCTGCATTGAAGTACTGGGGAACATCCACCACCACAAACTTTCCTATTAGTAACTACGAGAAGGAAGTGGAGGAAATGAAGCACATGACGAGACAAGAATTTGTGGCTGCCATTAGAAGAAAGAGTAGTGGGTTTTCAAGGGGTGCATCAATGTATCGTGGAGTTACAAGGCACCACCAGCATGGAAGATGGCAGGCGAGGATTGGAAGAGTTGCTGGAAACAAAGATCTTTATTTGGGAACTTTCAGTACGGAAGAGGAAGCGGCAGAAGCATACGACATAGCGGCAATAAAATTCAGAGGACTAAACGCAGTGACAAACTTCGACATGAGTCGTTACGACGTGAAAAGCATATTAGAAAGCAACACACTCCCAATCGGCGGTGGTGCAGCGAAACGGTTGAAAGAAGCCCAAGCCATGGAATCCTCTAGAAAGCGCGACGAAATGATAGCACCGGCCAGCTCCTTCCTCCAATATGGCACCTCTTCTTCTTCGTCTTCTAATAATAATAATAATAATAATAATAATAATTCCAGGCTTCACCAACAACCACCACCCAATTACCCTTTACTTCAAACACAGCCGCCTTTCATTTCTCTTCAAAACCAAAACCACCACGATATTTCTATTTCTCACTACACCACTACACACGATCCGGCGTCGTTTCATCACTCTACTTACCTCCAGCTTCACCATCCCCATCCATCTGATTCCACTAATTATCCAATATTCTACGCCGGTGGTGGTGGTGGTGGGTATGTTCATAATAATCATCCGGGGGGTTTGCTTCATGGTGGTATGATCAACATGGGCGGAGGAGGAGTACTGGAGACTACTAATAACAATAACAGTAATAGTAGTAGTAGTAATGGAGGGTACCTTGGTAATGCGTTGGGAGGGATGGGTTCTACTTCTACAACGGCGGCGGAGGAATATGCCCATCATGCCCTTGTTAAGGTTGATTATGATATGCCTAATTCTGCTGCTGCCGCTACTGGGTACGGGAACTGGTCCGGGGATTCGGTTCAGGCTGCTTCTAACAATGGCCTTTTTTCAATGTGGAATGATTCATATGTATAA 1773 44.16 MGSMNSNSNNWLSFPLSPTNPSLPPHLQTTTHQSHHFSLGNLENDNMEIPFQTHEWNLISSQGGGEVPKVADFLGISKAENEADLIGFNEIHQGNDTDNYLFPIARLVPVQQATLTPSITVDSTTNYDHLQDNSNSLQSLTLSMGSGKASTCEATPDNNTSNAATVDVTPRRTLDTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQSRKGRQGGYDKEEKAARAYDLAALKYWGTSTTTNFPISNYEKEVEEMKHMTRQEFVAAIRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTEEEAAEAYDIAAIKFRGLNAVTNFDMSRYDVKSILESNTLPIGGGAAKRLKEAQAMESSRKRDEMIAPASSFLQYGTSSSSSSNNNNNNNNNNSRLHQQPPPNYPLLQTQPPFISLQNQNHHDISISHYTTTHDPASFHHSTYLQLHHPHPSDSTNYPIFYAGGGGGGYVHNNHPGGLLHGGMINMGGGGVLETTNNNNSNSSSSNGGYLGNALGGMGSTSTTAAEEYAHHALVKVDYDMPNSAAAATGYGNWSGDSVQAASNNGLFSMWNDSYV 590
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 11708920 11713268 - Tan0008176.1 Tan07g0731 758262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan07g0731 590 MobiDBLite consensus disorder prediction 1 33 - -
Tan07g0731 590 CDD AP2 182 248 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan07g0731 590 MobiDBLite consensus disorder prediction 389 425 - -
Tan07g0731 590 SUPERFAMILY DNA-binding domain 182 248 IPR016177 GO:0003677(InterPro)
Tan07g0731 590 SMART rav1_2 282 346 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan07g0731 590 SMART rav1_2 183 252 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan07g0731 590 FunFam AP2-like ethylene-responsive transcription factor 281 342 - -
Tan07g0731 590 FunFam AP2-like ethylene-responsive transcription factor ANT 182 248 - -
Tan07g0731 590 SUPERFAMILY DNA-binding domain 281 342 IPR016177 GO:0003677(InterPro)
Tan07g0731 590 CDD AP2 281 342 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan07g0731 590 Gene3D AP2/ERF domain 183 248 IPR036955 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan07g0731 590 Gene3D AP2/ERF domain 282 342 IPR036955 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan07g0731 590 PRINTS Ethylene responsive element binding protein signature 322 342 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan07g0731 590 PRINTS Ethylene responsive element binding protein signature 184 195 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan07g0731 590 ProSiteProfiles AP2/ERF domain profile. 183 246 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan07g0731 590 Pfam AP2 domain 283 332 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan07g0731 590 ProSiteProfiles AP2/ERF domain profile. 282 340 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan07g0731 590 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 141 444 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g1481 Tan-Chr1:15019160 Tan07g0731 Tan-Chr7:11708920 4.80E-96 dispersed
Tan07g0731 Tan-Chr7:11708920 Tan09g1693 Tan-Chr9:68529824 5.80E-98 dispersed
Tan07g0731 Tan-Chr7:11708920 Tan08g1184 Tan-Chr8:28966042 1.30E-105 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
27909 PF00847 AP2 2.80E-09 CL0081 Tan TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan07g0731 K09285 - csv:101207097 772.311