Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan07g0731 | ATGGGGTCAATGAATTCAAATTCAAACAATTGGCTTTCATTTCCACTATCACCCACCAATCCTTCTTTACCACCACATCTTCAAACAACAACTCATCAATCCCATCACTTCTCTTTGGGTAATTTGGAGAATGATAATATGGAAATCCCATTTCAAACTCATGAGTGGAATCTGATAAGTAGTCAAGGCGGTGGTGAAGTTCCAAAAGTTGCAGACTTTTTAGGCATAAGCAAGGCAGAAAATGAGGCAGATCTCATTGGGTTTAATGAAATTCATCAGGGTAATGATACTGATAATTACTTGTTTCCAATCGCAAGATTGGTGCCTGTTCAACAAGCCACACTGACACCATCAATAACTGTGGACTCTACTACTAACTATGATCACCTTCAAGACAATTCAAATAGTTTGCAATCTTTGACCCTTTCCATGGGCAGTGGCAAGGCTTCTACTTGTGAAGCCACCCCTGATAATAATACCTCCAATGCCGCCACTGTTGATGTCACTCCGAGAAGAACTTTGGACACTTTTGGCCAAAGAACTTCCATTTATCGCGGTGTCACTCGGCATCGATGGACGGGAAGATATGAAGCACATTTGTGGGATAATAGTTGCAGGAGGGAAGGGCAGTCAAGGAAGGGTCGCCAAGGTGGGTATGATAAAGAAGAGAAAGCTGCGAGGGCTTATGATCTTGCTGCATTGAAGTACTGGGGAACATCCACCACCACAAACTTTCCTATTAGTAACTACGAGAAGGAAGTGGAGGAAATGAAGCACATGACGAGACAAGAATTTGTGGCTGCCATTAGAAGAAAGAGTAGTGGGTTTTCAAGGGGTGCATCAATGTATCGTGGAGTTACAAGGCACCACCAGCATGGAAGATGGCAGGCGAGGATTGGAAGAGTTGCTGGAAACAAAGATCTTTATTTGGGAACTTTCAGTACGGAAGAGGAAGCGGCAGAAGCATACGACATAGCGGCAATAAAATTCAGAGGACTAAACGCAGTGACAAACTTCGACATGAGTCGTTACGACGTGAAAAGCATATTAGAAAGCAACACACTCCCAATCGGCGGTGGTGCAGCGAAACGGTTGAAAGAAGCCCAAGCCATGGAATCCTCTAGAAAGCGCGACGAAATGATAGCACCGGCCAGCTCCTTCCTCCAATATGGCACCTCTTCTTCTTCGTCTTCTAATAATAATAATAATAATAATAATAATAATTCCAGGCTTCACCAACAACCACCACCCAATTACCCTTTACTTCAAACACAGCCGCCTTTCATTTCTCTTCAAAACCAAAACCACCACGATATTTCTATTTCTCACTACACCACTACACACGATCCGGCGTCGTTTCATCACTCTACTTACCTCCAGCTTCACCATCCCCATCCATCTGATTCCACTAATTATCCAATATTCTACGCCGGTGGTGGTGGTGGTGGGTATGTTCATAATAATCATCCGGGGGGTTTGCTTCATGGTGGTATGATCAACATGGGCGGAGGAGGAGTACTGGAGACTACTAATAACAATAACAGTAATAGTAGTAGTAGTAATGGAGGGTACCTTGGTAATGCGTTGGGAGGGATGGGTTCTACTTCTACAACGGCGGCGGAGGAATATGCCCATCATGCCCTTGTTAAGGTTGATTATGATATGCCTAATTCTGCTGCTGCCGCTACTGGGTACGGGAACTGGTCCGGGGATTCGGTTCAGGCTGCTTCTAACAATGGCCTTTTTTCAATGTGGAATGATTCATATGTATAA | 1773 | 44.16 | MGSMNSNSNNWLSFPLSPTNPSLPPHLQTTTHQSHHFSLGNLENDNMEIPFQTHEWNLISSQGGGEVPKVADFLGISKAENEADLIGFNEIHQGNDTDNYLFPIARLVPVQQATLTPSITVDSTTNYDHLQDNSNSLQSLTLSMGSGKASTCEATPDNNTSNAATVDVTPRRTLDTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQSRKGRQGGYDKEEKAARAYDLAALKYWGTSTTTNFPISNYEKEVEEMKHMTRQEFVAAIRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTEEEAAEAYDIAAIKFRGLNAVTNFDMSRYDVKSILESNTLPIGGGAAKRLKEAQAMESSRKRDEMIAPASSFLQYGTSSSSSSNNNNNNNNNNSRLHQQPPPNYPLLQTQPPFISLQNQNHHDISISHYTTTHDPASFHHSTYLQLHHPHPSDSTNYPIFYAGGGGGGYVHNNHPGGLLHGGMINMGGGGVLETTNNNNSNSSSSNGGYLGNALGGMGSTSTTAAEEYAHHALVKVDYDMPNSAAAATGYGNWSGDSVQAASNNGLFSMWNDSYV | 590 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 11708920 | 11713268 | - | Tan0008176.1 | Tan07g0731 | 758262 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan07g0731 | 590 | MobiDBLite | consensus disorder prediction | 1 | 33 | - | - | |
Tan07g0731 | 590 | CDD | AP2 | 182 | 248 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Tan07g0731 | 590 | MobiDBLite | consensus disorder prediction | 389 | 425 | - | - | |
Tan07g0731 | 590 | SUPERFAMILY | DNA-binding domain | 182 | 248 | IPR016177 | GO:0003677(InterPro) | |
Tan07g0731 | 590 | SMART | rav1_2 | 282 | 346 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Tan07g0731 | 590 | SMART | rav1_2 | 183 | 252 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Tan07g0731 | 590 | FunFam | AP2-like ethylene-responsive transcription factor | 281 | 342 | - | - | |
Tan07g0731 | 590 | FunFam | AP2-like ethylene-responsive transcription factor ANT | 182 | 248 | - | - | |
Tan07g0731 | 590 | SUPERFAMILY | DNA-binding domain | 281 | 342 | IPR016177 | GO:0003677(InterPro) | |
Tan07g0731 | 590 | CDD | AP2 | 281 | 342 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Tan07g0731 | 590 | Gene3D | AP2/ERF domain | 183 | 248 | IPR036955 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Tan07g0731 | 590 | Gene3D | AP2/ERF domain | 282 | 342 | IPR036955 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Tan07g0731 | 590 | PRINTS | Ethylene responsive element binding protein signature | 322 | 342 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Tan07g0731 | 590 | PRINTS | Ethylene responsive element binding protein signature | 184 | 195 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Tan07g0731 | 590 | ProSiteProfiles | AP2/ERF domain profile. | 183 | 246 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Tan07g0731 | 590 | Pfam | AP2 domain | 283 | 332 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Tan07g0731 | 590 | ProSiteProfiles | AP2/ERF domain profile. | 282 | 340 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Tan07g0731 | 590 | PANTHER | AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR | 141 | 444 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan01g1481 | Tan-Chr1:15019160 | Tan07g0731 | Tan-Chr7:11708920 | 4.80E-96 | dispersed | |
Tan07g0731 | Tan-Chr7:11708920 | Tan09g1693 | Tan-Chr9:68529824 | 5.80E-98 | dispersed | |
Tan07g0731 | Tan-Chr7:11708920 | Tan08g1184 | Tan-Chr8:28966042 | 1.30E-105 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
27909 | PF00847 | AP2 | 2.80E-09 | CL0081 | Tan | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan07g0731 | K09285 | - | csv:101207097 | 772.311 |