Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan07g0737 ATGACTGATCCCTACTCTTCCATCAATGGCTCTTTTGGTTTATACCATTACTTTTCTTCTTCTTCTTCTTCTTCTTCTTCCAACACTTGTTCTAATTCTTTCTCTCCTTATGATCTCTTCTCTCTTTCTTACTCCAATGATAATCATAATACCAATACCCTAAAAAACTCCTCTTTCACTACAACCCATGAATTCTTTTCCCCACCTCCTTCTTCCTCTCCTCAAGTCCTTCCCCTTTTAACCTTAAGCCCTGCAAGACATGATCATGATCATGATCATGATCAACACAATAAGAAGAAGAAGAAGAAGAACAACAACAACAACTTGTGTAGCCCTTGTGAAGATGATGATATTGATATTGATATTGATATTGATGATGACGACGACGACGACGATGAGACTGTTACTGTTGCTTTGCATTTAGGGCTTCCAACTGCAGCTCCTAATTCTTCTGATCTGATTTTGAGGCTTTCTTCAACTGAGATCTCAGAAGATCATAAATTACAAAATCAATTAGAAGAAACTGTTCCTGTTGTTGTTCCTAATCATCATTATTACTCACTGTCTTCTTCTTCTTCTTCCTCCTCCACAACTCCTACTTCTGGACTCAACAAGGGTCAGTATTGGATTCCCACTCCTTCTCAGATTCTCATTGGTCCAACTCAGTTTTCTTGCCCTCTTTGCTTCAAGACCTTCAACAGATACAACAACATGCAGATGCATATGTGGGGGCATGGATCTCAATACAGAAAAGGGCCACAGTCACTAAGAGGAACACAACCAACAGCGATGTTAAGGCTCCCATGTTACTGCTGTGCTCCAGGGTGCAGAAACAACATAGACCATCCAAGGTCAAAGCCACTAAAAGACTTCAGAACCCTTCAAACACATTACAAAAGAAAGCATGGAATCAAGCCATTTACATGTAGAAAATGTGGGAAAGCCTTTGCTGTGAGAGGGGATTGGAGAACTCATGAGAAAAACTGTGGGAAGCTTTGGCATTGCACTTGTGGCTCTGATTTTAAGCACAAAAGATCTCTCAAAGATCACATCAAAGCCTTTGGACATGGCCATGCAGCTTATGGGATTGACTCTTTTGATGAAGATGATGAGCCTGCTTCTGAGATTGAACATGATAATAATGACTTCTCTCTCAGCAATGGAGATTGA 1170 40.34 MTDPYSSINGSFGLYHYFSSSSSSSSSNTCSNSFSPYDLFSLSYSNDNHNTNTLKNSSFTTTHEFFSPPPSSSPQVLPLLTLSPARHDHDHDHDQHNKKKKKKNNNNNLCSPCEDDDIDIDIDIDDDDDDDDETVTVALHLGLPTAAPNSSDLILRLSSTEISEDHKLQNQLEETVPVVVPNHHYYSLSSSSSSSSTTPTSGLNKGQYWIPTPSQILIGPTQFSCPLCFKTFNRYNNMQMHMWGHGSQYRKGPQSLRGTQPTAMLRLPCYCCAPGCRNNIDHPRSKPLKDFRTLQTHYKRKHGIKPFTCRKCGKAFAVRGDWRTHEKNCGKLWHCTCGSDFKHKRSLKDHIKAFGHGHAAYGIDSFDEDDEPASEIEHDNNDFSLSNGD 389
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 11750849 11753774 - Tan0020644.1 Tan07g0737 758268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan07g0737 389 Gene3D Classic Zinc Finger 222 245 - -
Tan07g0737 389 FunFam Zinc finger protein WIP2 276 358 - -
Tan07g0737 389 ProSiteProfiles Zinc finger C2H2 type domain profile. 223 250 IPR013087 -
Tan07g0737 389 SUPERFAMILY beta-beta-alpha zinc fingers 288 327 IPR036236 -
Tan07g0737 389 Pfam BIRD-IDD transcription factor, third C2HC zinc finger 306 330 - -
Tan07g0737 389 MobiDBLite consensus disorder prediction 369 389 - -
Tan07g0737 389 MobiDBLite consensus disorder prediction 85 116 - -
Tan07g0737 389 ProSiteProfiles Zinc finger C2H2 type domain profile. 307 334 IPR013087 -
Tan07g0737 389 ProSitePatterns Zinc finger C2H2 type domain signature. 225 245 IPR013087 -
Tan07g0737 389 Gene3D Classic Zinc Finger 280 361 - -
Tan07g0737 389 PANTHER ZINC FINGER PROTEIN WIP2 44 381 IPR043584 GO:0003700(InterPro)|GO:0005634(PANTHER)|GO:0010468(InterPro)|GO:0010468(PANTHER)|GO:0048856(PANTHER)
Tan07g0737 389 Pfam Zinc finger, C2H2 type 223 242 IPR013087 -
Tan07g0737 389 SMART c2h2final6 223 245 IPR013087 -
Tan07g0737 389 SMART c2h2final6 307 327 IPR013087 -
Tan07g0737 389 SMART c2h2final6 333 356 IPR013087 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan07g0737 Tan-Chr7:11750849 Tan08g1447 Tan-Chr8:59219365 5.60E-97 dispersed
Tan03g0269 Tan-Chr3:41076511 Tan07g0737 Tan-Chr7:11750849 9.10E-101 transposed
Tan06g0567 Tan-Chr6:4335233 Tan07g0737 Tan-Chr7:11750849 5.80E-99 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
27910 None None None None Tan TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan07g0737 - - - 0.0