Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan07g0793 ATGACTTCTTCGGGAATCTCTGTTGAAATCGCCCAATTGTCAGATGCCGTTCAAGAACTGAAAGTTTGCGACCAGATGGAAATGGGAAAGAAGGCAGAGATTCAAGGAACGGGGCATGGGAGTCATGATGGGGCTTGTGCAATTTGCTTAAATAAGATTGCTCTTCAAGAAACTGCCTTAGTGAGAGGTTGCGAGCATGCCTATTGTGCAACTTGCATCCTTCGATGGGCCTCATATACTCAAAAACCGACTTGTCCACAATGTAAACATCCATTTGAGTTCCTGATCGTGCATCGTTCTCTTGATGGGAGCATCCATGACTATATGTTTGAGGAGAGTGTATGCCTGCTTCTGAGAGCTTCATGGTATAAACCACTGATCGTTGAAGATCGGGAGGAAACCTATGATGATCTTGAGGAGTACTATCCTTACGAGGATGACGATGAAGAGTTTGAGGAAGCTTACTTGGGTGCATCGCCCAGTCTCCGAATCGGAAATCGGAGGTGGGGAGACAATGGATATGTGAGGGCAGGTCGACAAGAAGCACGGCCAGTTTTTAGGCCAACTGTTCCAGAGTTTGCAGGAGCTAGCTCATCACGCGAGCCTATAAAGAAAGATGCTTCCAAAGATAAAACAGGTCGGCGAGCTAAAAGGGCCCTGAAACGGGAAGCTGCTGATAAAGCTGCAGCAGCTAAACATCAGGAACATTTAGCTAGGTTCGGCCGGAAGTGA 732 47.13 MTSSGISVEIAQLSDAVQELKVCDQMEMGKKAEIQGTGHGSHDGACAICLNKIALQETALVRGCEHAYCATCILRWASYTQKPTCPQCKHPFEFLIVHRSLDGSIHDYMFEESVCLLLRASWYKPLIVEDREETYDDLEEYYPYEDDDEEFEEAYLGASPSLRIGNRRWGDNGYVRAGRQEARPVFRPTVPEFAGASSSREPIKKDASKDKTGRRAKRALKREAADKAAAAKHQEHLARFGRK 243
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 12722276 12725300 + Tan0014165.1 Tan07g0793 758324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan07g0793 243 SMART ring_2 46 88 IPR001841 -
Tan07g0793 243 MobiDBLite consensus disorder prediction 192 243 - -
Tan07g0793 243 ProSitePatterns Zinc finger RING-type signature. 64 73 IPR017907 -
Tan07g0793 243 MobiDBLite consensus disorder prediction 202 243 - -
Tan07g0793 243 SUPERFAMILY RING/U-box 39 96 - -
Tan07g0793 243 Pfam Ring finger domain 45 89 IPR001841 -
Tan07g0793 243 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 6 243 - -
Tan07g0793 243 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 32 95 IPR013083 -
Tan07g0793 243 ProSiteProfiles Zinc finger RING-type profile. 46 89 IPR001841 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan07g0793 - - - 0.0