Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan07g0832 ATGAAATACTGCGTTGATGCACTCGTTCTAACCAGATTGATAATTTTAGTACCAACTTTTGCCGCCATCTTAGCAGCAAATAATTCCCCACCGGTTCCAAGCGACAAGTCGCAACTAAACAAATGGTTTTCCGACAACGTGAAGCCGTTTTCCGGTCGCAAGGCGGAGCTTGATCCGGCCCTCGTGGCCGCCGAAGGAAGCGCCACCGTGATTAAAGTAAGGGCCAACGGAAGCGGAGATTTCAAGACGGTGACGGAAGCCATCAACAGCGTTCCAGCTGGTAATACCAAACGCGTTGTGATTTGGATTGGAGGAGGAGTTTATAAAGAGAAGCTTAAGATTGATAGAAATAAGCCATTTGTTACCTTATATGGGTCTCCTAATAGTATGCCCATTTTGACCTTCAATGGCGATGCTAGAACATACGGCACCGTTTACAGTGCCACTTTGATTGTTGAATCTGATTATTTTGTTGCTGCCAATCTCGTTATTCAGAATTCATCTCCAAGGCCAGATGTGTTAACGAAAGGAGGACAAGCATTAGCGGCAAGATTATTTGGAAATAAAGCGGCAGTTTACAATTGCAAATTCATTGGGTTTCAAGATACCCTTTGCGACGACGCCGGTTTTCATCTCTACAAGGATTGCTTCATTCAAGGCACCGTCGACTTCATTTTCGGAAGAGGAACATCCCTTTATTTGAACAGTCAATTGGATGTGGTGGGAGACGGACGATTGGCAGTGATCACAGCGCATTCAAGAAAAGAAGAATCAGACGGAAGTGGTTATTCATTTGTGCATTGCACCATTACAGGAACTGGCGGTAAAAACACTTATTTGGGAAGATCTTGGATGCCTAGATCTAGAGTTATCTTCTCCTACACCAAAATGGCCGACATTATTCATCCCGATCGCTGGAACGACATGAAACATCCCTTTGACGACACGGTTTTCTATGGAGAATACAAGTGTTCGGGACCGGGTTCGGAGCCTAGCACACGTGTAAGAATCGGCAAGCAGATGAGTGCTGCGGAAGTGAAGCCCTTCCTCAGTTTGGATTATTTGCAGAGTGAAAAGTGGCTGCTTCCTCCTCCTGATCCCAAGGCAATGGGATTTTAA 1119 45.4 MKYCVDALVLTRLIILVPTFAAILAANNSPPVPSDKSQLNKWFSDNVKPFSGRKAELDPALVAAEGSATVIKVRANGSGDFKTVTEAINSVPAGNTKRVVIWIGGGVYKEKLKIDRNKPFVTLYGSPNSMPILTFNGDARTYGTVYSATLIVESDYFVAANLVIQNSSPRPDVLTKGGQALAARLFGNKAAVYNCKFIGFQDTLCDDAGFHLYKDCFIQGTVDFIFGRGTSLYLNSQLDVVGDGRLAVITAHSRKEESDGSGYSFVHCTITGTGGKNTYLGRSWMPRSRVIFSYTKMADIIHPDRWNDMKHPFDDTVFYGEYKCSGPGSEPSTRVRIGKQMSAAEVKPFLSLDYLQSEKWLLPPPDPKAMGF 372
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 13430183 13431626 - Tan0007933.1 Tan07g0832 758363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan07g0832 372 FunFam Pectinesterase 66 363 - -
Tan07g0832 372 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 31 361 - GO:0030599(PANTHER)|GO:0045490(PANTHER)|GO:0052689(PANTHER)
Tan07g0832 372 Gene3D - 66 364 IPR012334 -
Tan07g0832 372 ProSitePatterns Pectinesterase signature 2. 218 227 IPR033131 -
Tan07g0832 372 Pfam Pectinesterase 72 356 IPR000070 GO:0030599(InterPro)|GO:0042545(InterPro)
Tan07g0832 372 SUPERFAMILY Pectin lyase-like 66 363 IPR011050 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan02g1980 Tan-Chr2:88702693 Tan07g0832 Tan-Chr7:13430183 8.10E-57 dispersed
Tan07g0832 Tan-Chr7:13430183 Tan07g0834 Tan-Chr7:13574967 2.60E-213 dispersed
Tan07g0832 Tan-Chr7:13430183 Tan07g0833 Tan-Chr7:13437011 8.20E-215 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan07g0832 K01051 - csv:101205095 554.288