Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Tan07g0833 ATGAAATACTGCGTTGATGCACTCGTTCTAACCAGATTGATTATTTTAGTACCAACTTTTGCCGCCATCTTAGCAGCAAATAATTCCCCACCGGTTCCAAGCGACAAGTCGCAACTAAACGAATGGTTTTCCGACAACGTGAAGCCGTTTTCCGGTCGCGAGGCGGAGCTTGATCCGGCCCTCGTCGCCGCCGAAGAAAGCGCCACCGTGGTTAAAGTAAGGTCCGACGGAAGCGGAGATTTCAAGACGGTGACAGAAGCCATCAACAGCGTTCCACCTGGTAATACCAAGCGCGTTGTGATTTGGATCGGAGGAGGAGTTTATAAAGAGAAACTTAAGATTGATAGAAATAAGCCATTTGTTACCTTATATGGGTCTCCTAATAATATGCCCATTTTGACCTTCAATGGCGATGCTAGAACATACGGCACCGTTTACAGTGCGACTTTGATTGTTGAATCTGATTATTTTGTTGCTGCCAATCTCGTTATTCAGAATTCATCTCCAAGGCCAGATGTGTTAACGAAAGGAGGACAAGCATTAGCGGCAAGATTATTTGGAAATAAAGCGGCAGTTTACAATTGCAAATTCATTGGGTTTCAAGATACCCTTTGCGACGACGCCGGTTTTCATCTCTACAAGGATTGCTTCATTCAAGGCACCGTCGACTTCATTTTCGGAAGAGGAACATCCCTTTATTTGAACAGTCAATTGGATGTGGTGGGAGACGGACGATTGGCAGTGATCACAGCGCATTCAAGAAAAGAAGAATCAGACGGAAGTGGTTATTCATTTGTGCATTGCACCATTACAGGAACTGGCGGTAAAAACACTTATTTGGGAAGATCTTGGATGCCTAGATCTAGAGTTATCTTCTCCTACACCAAAATGGCCGACATTATTCATCCCGATCGCTGGAACGACATGAAACATCCCTTTGACGACACGGTTTTCTATGGAGAATACAAGTGTTCGGGGCCAGGTTCGGAGCCTAGCACGCGTGTAAGAATCGGCAAGCAAATGAGTGATGCGGAAGTGAAGCCCTTCCTCAGCTTGGATTATTTGCAGAGTGAAAAGTGGCTGCTTCCTCCTCCTGATCCCAAGGCAATGGGATTTTAA 1119 45.49 MKYCVDALVLTRLIILVPTFAAILAANNSPPVPSDKSQLNEWFSDNVKPFSGREAELDPALVAAEESATVVKVRSDGSGDFKTVTEAINSVPPGNTKRVVIWIGGGVYKEKLKIDRNKPFVTLYGSPNNMPILTFNGDARTYGTVYSATLIVESDYFVAANLVIQNSSPRPDVLTKGGQALAARLFGNKAAVYNCKFIGFQDTLCDDAGFHLYKDCFIQGTVDFIFGRGTSLYLNSQLDVVGDGRLAVITAHSRKEESDGSGYSFVHCTITGTGGKNTYLGRSWMPRSRVIFSYTKMADIIHPDRWNDMKHPFDDTVFYGEYKCSGPGSEPSTRVRIGKQMSDAEVKPFLSLDYLQSEKWLLPPPDPKAMGF 372
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
7 13437011 13438427 - Tan0015706.1 Tan07g0833 758364
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Tan07g0833 372 FunFam Pectinesterase 66 363 - -
Tan07g0833 372 Gene3D - 64 364 IPR012334 -
Tan07g0833 372 ProSitePatterns Pectinesterase signature 2. 218 227 IPR033131 -
Tan07g0833 372 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 31 361 - GO:0030599(PANTHER)|GO:0045490(PANTHER)|GO:0052689(PANTHER)
Tan07g0833 372 Pfam Pectinesterase 71 356 IPR000070 GO:0030599(InterPro)|GO:0042545(InterPro)
Tan07g0833 372 SUPERFAMILY Pectin lyase-like 67 363 IPR011050 -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan07g0833 Tan-Chr7:13437011 Tan09g1036 Tan-Chr9:62550638 6.30E-106 dispersed
Tan07g0832 Tan-Chr7:13430183 Tan07g0833 Tan-Chr7:13437011 8.20E-215 tandem
Tan07g0833 Tan-Chr7:13437011 Tan07g0834 Tan-Chr7:13574967 1.60E-218 tandem
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan07g0833 K01051 - csv:101205095 561.222