Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan07g0834 ATGAAATACTGCATTGATGCACTCGTTCTAACCAGATTGATTATTTTAGTATCAACTTTCGCCGCCATCTTCGCTGCAAATAATTCCCCACCGGTTCCAAGCGACAAGTCGCAACTAAACGAATGGTTTTCCGACAACGTGAAGCCGTTTTCCGGTCGCGAGGCGGAGCTTGATCCGGCCCTCGTCGCCGCCGAAGAAAGCGCCACCGTGGTTAAAGTAAGGTCCGACGGAAGCGGAGATTTCAAGACGGTGACAGAAGCCATCAACAGCGTTCCACCTGGTAATACCAAGCGCGTTGTGATTTGGATCGGAGGAGGAGTTTATAAAGAGAAACTTAAGATTGATAGAAATAAGCCATTTGTTACCTTATATGGGTCTCCTAATAATATGCCCATTTTGACCTTCAATGGCGATGCTAGAACATACGGCACCGTTTACAGTGCGACTTTGATTGTTGAATCTGATTATTTTGTTGCTGCCAATCTCGTTATTCAGAATTCATCTCCAAGGCCAGATGTGTTAACGAAAGGAGGACAAGCATTAGCGGCAAGATTATTTGGAAATAAAGCGGCAGTTTACAATTGCAAATTCATTGGGTTTCAAGATACCCTTTGCGACGACGCCGGTTTTCATCTCTACAAGGATTGCTTCATTCAAGGCACCGTCGACTTCATTTTCGGAAGAGGAACATCCCTTTATTTGAACAGTCAATTGGATGTGGTGGGAGACGGACGATTGGCAGTGATCACAGCGCATTCAAGAAAAGAAGAATCAGACGGAAGTGGTTATTCATTTGTGCATTGCACCATTACAGGAACTGGCGGTAAAAACACTTATTTGGGAAGATCTTGGATGCCTAGATCTAGAGTTATCTTCTCCTACACCAAAATGGCCGACATTATTCATCCCGATCGCTGGAACGACATGAAACATCCCTTTGACGACACGGTTTTCTATGGAGAATACAAGTGTTCGGGGCCAGGTTCGGAGCCTAGCACGCGTGTAAGAATCGGCAAGCAAATGAGTGATGCGGAAGTGAAGCCCTTCCTCAGCTTGGATTATTTGCAGAGTGAAAAGTGGCTGCTTCCTCCTCCTGATCCCAAGGCAATGGGATTTTAA 1119 45.49 MKYCIDALVLTRLIILVSTFAAIFAANNSPPVPSDKSQLNEWFSDNVKPFSGREAELDPALVAAEESATVVKVRSDGSGDFKTVTEAINSVPPGNTKRVVIWIGGGVYKEKLKIDRNKPFVTLYGSPNNMPILTFNGDARTYGTVYSATLIVESDYFVAANLVIQNSSPRPDVLTKGGQALAARLFGNKAAVYNCKFIGFQDTLCDDAGFHLYKDCFIQGTVDFIFGRGTSLYLNSQLDVVGDGRLAVITAHSRKEESDGSGYSFVHCTITGTGGKNTYLGRSWMPRSRVIFSYTKMADIIHPDRWNDMKHPFDDTVFYGEYKCSGPGSEPSTRVRIGKQMSDAEVKPFLSLDYLQSEKWLLPPPDPKAMGF 372
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 13574967 13576383 - Tan0005976.1 Tan07g0834 758365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan07g0834 372 FunFam Pectinesterase 66 363 - -
Tan07g0834 372 Gene3D - 64 364 IPR012334 -
Tan07g0834 372 ProSitePatterns Pectinesterase signature 2. 218 227 IPR033131 -
Tan07g0834 372 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 21 361 - GO:0030599(PANTHER)|GO:0045490(PANTHER)|GO:0052689(PANTHER)
Tan07g0834 372 Pfam Pectinesterase 71 356 IPR000070 GO:0030599(InterPro)|GO:0042545(InterPro)
Tan07g0834 372 SUPERFAMILY Pectin lyase-like 67 363 IPR011050 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan07g0832 Tan-Chr7:13430183 Tan07g0834 Tan-Chr7:13574967 2.60E-213 dispersed
Tan07g0834 Tan-Chr7:13574967 Tan09g1036 Tan-Chr9:62550638 9.00E-105 dispersed
Tan07g0833 Tan-Chr7:13437011 Tan07g0834 Tan-Chr7:13574967 1.60E-218 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan07g0834 K01051 - csv:101205095 560.836