Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan07g0870 ATGCCCACTCTCCCCAGAAAACCTCCATTTCCATTTCCATTTCCATTTCCCAGTTCTAAATCCACCTTCCTTTTCCTTTCCATGGCTTCCCTCTCCTTCCTCTCTTTCCTCTCCCTCTTCTTCTTCTTCCTCTCCCTCTCCTCCGCCGCCCGCCACCGCCACCGCGCAACCCATTTCACTGACCCACCAACGGCCGACGTCTTCCACGCCTGCAAGGCCACCCGTTTTCCCGACCAATGCGGATCTTCCCTCTCTCAATCCTCCTCTCTCCCTCCCAATCCCACCCCTCTCCAGATCGTTCAATCCGCCGTCGGCGTCTCCTCCGACGGTCTTACCACGGCGCAGTCCATGGTCAAAGACATTCTTGATTCCTCCGCCAAGAATCTCAATCGGACCACTGCCGCCAGGAATTGCCTCGAGGTGTTGCGGAATTCCGAGTACCGAATTTCTCTGAGCAATGAGGCTCTCCGCCGAGGTCGGACCAAAGACGCGCGCGCGTGGTTGAGCGCGTCGCTGCTCTACCATTACGATTGCTGGTCCGCCCTCAAGTACGCCAACGACACCCAGTTGGTCGATAAAACGATGGCGTTTCTCGACTCTCTCATCGGCCTCTCCAGCAACGCCCTGAGTATGTTGCTCGCTTACGACATCTCCGGCAACGACACGGCGGCGTGGGGACCCCCGAGGACGGAACGCGACGGGTTCTGGGAGGGCGGCGTTGGTGGCGGATCTGGGTTGGGGTTCCGCGGTGGGTTCCCGTCGAAGCTGGAAGCTGACGCGACGGTGTGCAAGGACGGCGCCGGCGGATGTTACAGGACCATACAGGAAGCCGTTAATGCCGCGCCGGAGAACGCGGCGGCCCGTAGGTTTGTGATTCACATCAAGGAAGGCGTTTACGAAGAAATCGTGAGGGTTCCGTTAGAAAAGAAGAATGTGGTGTTTTGGGGAGATGGAAAGGGCAAAACGGTAATTACGGGGTCACTGAATGTGGGCCAGCCTGGAATTTCGACTTATAACACGGCTACCGTTGGAGTACTTGGTGATGGATTCATGGCTAGTGGTCTGACCATTCAAAACACAGCAGGGCCTGATGCCCATCAAGCTGTGGCCTTTAGATCAGACAGTGATCTCTCTGTCATTCAAGACTGTGAGTTTATAGGCAACCAAGACACTCTCTACGCTCACTCCCTCAGACAGTTCTACAAATCCTGTCGGATTCAAGGCAATGTAGATTTCATCTTTGGAAACTCAGCTTCCATCTTTCAGGACTGTGAGATCCTAGTCCGTCCCCGACAACTCAAGCCCGAGAAAGGCGAGAACAACGCCGTTACTGCTCAGGGAAGGACCGACCCTGCTCAATCGACCGGTTTCGTGTTCCAGAACTGCCTCATAAATGGCACTGAGGAGTACATGTCATTGTACTACAGCAAGCCTAAAGTGCACAAGAACTTCTTGGGGAGGCCGTGGAAGGAGTACTCGAGGACGGTTTTCATACATTGTAATCTCGAGGCTCTCGTTTCGCCGCCCGGGTGGATGCCGTGGAGCGGGGATTTTGCATTGAAAACGCTCTTCTATGGGGAGTTTGAGAATTCAGGGGCGGGGTCGAAGTTGCCGGAGCGAGTCGGGTGGAGTAGCCAGATTCCAGCACAGCATGTTTTTAGTTACTCTGTTGAGAATTTCATTCAGGGAGATGAATGGATTCCTTCATCTCAATCATCTAATCAACCCAAAATGTTGAACAGAAAAAGCAAAAATGTGAAATTAGATTAG 1770 53.79 MPTLPRKPPFPFPFPFPSSKSTFLFLSMASLSFLSFLSLFFFFLSLSSAARHRHRATHFTDPPTADVFHACKATRFPDQCGSSLSQSSSLPPNPTPLQIVQSAVGVSSDGLTTAQSMVKDILDSSAKNLNRTTAARNCLEVLRNSEYRISLSNEALRRGRTKDARAWLSASLLYHYDCWSALKYANDTQLVDKTMAFLDSLIGLSSNALSMLLAYDISGNDTAAWGPPRTERDGFWEGGVGGGSGLGFRGGFPSKLEADATVCKDGAGGCYRTIQEAVNAAPENAAARRFVIHIKEGVYEEIVRVPLEKKNVVFWGDGKGKTVITGSLNVGQPGISTYNTATVGVLGDGFMASGLTIQNTAGPDAHQAVAFRSDSDLSVIQDCEFIGNQDTLYAHSLRQFYKSCRIQGNVDFIFGNSASIFQDCEILVRPRQLKPEKGENNAVTAQGRTDPAQSTGFVFQNCLINGTEEYMSLYYSKPKVHKNFLGRPWKEYSRTVFIHCNLEALVSPPGWMPWSGDFALKTLFYGEFENSGAGSKLPERVGWSSQIPAQHVFSYSVENFIQGDEWIPSSQSSNQPKMLNRKSKNVKLD 589
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 14863718 14866668 + Tan0006965.1 Tan07g0870 758401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan07g0870 589 Pfam Plant invertase/pectin methylesterase inhibitor 69 211 IPR006501 GO:0004857(InterPro)
Tan07g0870 589 SMART PMEI_2 62 211 IPR006501 GO:0004857(InterPro)
Tan07g0870 589 SUPERFAMILY Pectin lyase-like 257 569 IPR011050 -
Tan07g0870 589 FunFam Probable pectinesterase/pectinesterase inhibitor 51 65 214 - -
Tan07g0870 589 Gene3D - 253 576 IPR012334 -
Tan07g0870 589 PANTHER PECTINESTERASE 33 569 - GO:0030599(PANTHER)|GO:0046910(PANTHER)
Tan07g0870 589 CDD PMEI-like_3 70 216 - -
Tan07g0870 589 Gene3D Invertase/pectin methylesterase inhibitor family protein 64 214 IPR035513 -
Tan07g0870 589 MobiDBLite consensus disorder prediction 568 589 - -
Tan07g0870 589 NCBIfam pectinesterase inhibitor domain 37 211 IPR006501 GO:0004857(InterPro)
Tan07g0870 589 Pfam Pectinesterase 259 564 IPR000070 GO:0030599(InterPro)|GO:0042545(InterPro)
Tan07g0870 589 FunFam Pectinesterase 253 578 - -
Tan07g0870 589 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 69 211 IPR035513 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan07g0870 Tan-Chr7:14863718 Tan10g0389 Tan-Chr10:3069015 1.40E-75 dispersed
Tan07g0869 Tan-Chr7:14777265 Tan07g0870 Tan-Chr7:14863718 4.60E-225 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan07g0870 - - - 0.0