Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan07g0882 | ATGGCCGATGCTGAGGATATCCAGCCACTTGTTTGCGATAATGGAACTGGAATGGTGAAGGCTGGATTTGCTGGTGATGATGCTCCCAGGGCAGTGTTTCCCAGTATTGTTGGTCGACCCCGACACACTGGTGTCATGGTAGGTATGGGGCAGAAAGATGCTTATGTTGGTGATGAGGCACAATCCAAAAGAGGTATTCTTACCTTGAAATATCCCATTGAGCATGGTATTGTGAGCAACTGGGATGATATGGAAAAGATCTGGCATCACACATTCTACAATGAGCTTCGTGTTGCACCTGAAGAACACCCAGTGCTTCTTACTGAAGCTCCTCTCAATCCTAAAGCCAACAGAGAAAAGATGACACAAATCATGTTTGAGACTTTTAATGTACCTGCCATGTATGTTGCCATCCAGGCTGTTCTATCTCTGTATGCCAGTGGTCGTACAACAGGTATTGTGCTTGACTCTGGTGATGGTGTTAGTCACACTGTGCCAATCTATGAGGGTTATGCTCTACCTCATGCTATCCTCCGTCTGGACCTTGCTGGCCGTGATCTAACCGATGCTTTGATGAAGATTCTCACTGAGAGAGGGTACATGTTCACAACCACTGCCGAACGAGAAATTGTCCGTGACATGAAAGAGAAGCTTGCTTATGTTGCACTCGACTACGAGCAGGAACTTGAGACTGCCAAGAGCAGCTCCTCAATTGAGAAGAACTACGAACTGCCTGATGGACAAGTCATCACAATTGGAGCTGAGAGGTTCCGTTGCCCCGAAGTTCTTTTCCAGCCATCCCTCATCGGAATGGAAGCTGCTGGAATCCATGAGACTACGTACAACTCAATCATGAAGTGTGACGTGGATATCAGAAAAGATTTGTATGGAAACATTGTTCTCAGTGGTGGTTCTACCATGTTCCCTGGTATCGCAGACCGAATGAGCAAAGAGATCACAGCTCTTGCACCCAGCAGCATGAAAATTAAGGTCGTTGCACCACCCGAAAGGAAATACAGTGTCTGGATTGGAGGGTCAATCCTTGCATCGCTCAGCACCTTCCAGCAGATGTGGATTTCGAAGGGCGAGTATGACGAATCTGGCCCATCCATCGTCCATAGGAAGTGCTTCTAA | 1134 | 47.18 | MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSIEKNYELPDGQVITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF | 377 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 15847224 | 15850610 | + | Tan0018604.1 | Tan07g0882 | 758413 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan07g0882 | 377 | Gene3D | - | 10 | 371 | - | - | |
Tan07g0882 | 377 | PRINTS | Actin signature | 51 | 62 | IPR004000 | - | |
Tan07g0882 | 377 | PRINTS | Actin signature | 63 | 85 | IPR004000 | - | |
Tan07g0882 | 377 | PRINTS | Actin signature | 142 | 161 | IPR004000 | - | |
Tan07g0882 | 377 | PRINTS | Actin signature | 28 | 37 | IPR004000 | - | |
Tan07g0882 | 377 | PRINTS | Actin signature | 117 | 130 | IPR004000 | - | |
Tan07g0882 | 377 | PRINTS | Actin signature | 238 | 254 | IPR004000 | - | |
Tan07g0882 | 377 | CDD | NBD_sugar-kinase_HSP70_actin | 10 | 183 | - | - | |
Tan07g0882 | 377 | FunFam | Major actin | 261 | 340 | - | - | |
Tan07g0882 | 377 | ProSitePatterns | Actins and actin-related proteins signature. | 106 | 118 | IPR020902 | - | |
Tan07g0882 | 377 | FunFam | Actin, muscle | 182 | 273 | - | - | |
Tan07g0882 | 377 | SUPERFAMILY | Actin-like ATPase domain | 148 | 377 | IPR043129 | - | |
Tan07g0882 | 377 | Gene3D | Actin; Chain A, domain 4 | 182 | 273 | - | - | |
Tan07g0882 | 377 | SMART | actin_3 | 7 | 377 | IPR004000 | - | |
Tan07g0882 | 377 | ProSitePatterns | Actins signature 1. | 55 | 65 | IPR004001 | - | |
Tan07g0882 | 377 | FunFam | Putative actin-related protein 5 | 341 | 369 | - | - | |
Tan07g0882 | 377 | Gene3D | - | 140 | 340 | - | - | |
Tan07g0882 | 377 | SUPERFAMILY | Actin-like ATPase domain | 6 | 155 | IPR043129 | - | |
Tan07g0882 | 377 | Pfam | Actin | 5 | 377 | IPR004000 | - | |
Tan07g0882 | 377 | FunFam | Actin, alpha skeletal muscle | 3 | 180 | - | - | |
Tan07g0882 | 377 | ProSitePatterns | Actins signature 2. | 358 | 366 | IPR004001 | - | |
Tan07g0882 | 377 | PANTHER | ACTIN | 8 | 369 | IPR004000 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan03g1336 | Tan-Chr3:69919421 | Tan07g0882 | Tan-Chr7:15847224 | 1.50E-219 | dispersed | |
Tan03g1337 | Tan-Chr3:69919421 | Tan07g0882 | Tan-Chr7:15847224 | 1.50E-219 | dispersed | |
Tan04g0128 | Tan-Chr4:818357 | Tan07g0882 | Tan-Chr7:15847224 | 3.90E-59 | dispersed | |
Tan06g0586 | Tan-Chr6:4503859 | Tan07g0882 | Tan-Chr7:15847224 | 5.40E-52 | dispersed | |
Tan07g0882 | Tan-Chr7:15847224 | Tan07g0884 | Tan-Chr7:15847794 | 1.50E-219 | dispersed | |
Tan07g0882 | Tan-Chr7:15847224 | Tan07g0883 | Tan-Chr7:15847794 | 1.50E-219 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan07g0882 | K10355 | - | csv:101215469 | 758.059 |