Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan07g0900 ATGGAAGAAAAGAAAGCTTATGCTGCAGTGTTGCTGAGACATGGAATATATGCAGTCATGTTCCTGCTCTCAAAAGCTGCATTTGATGGTGGAATGAACAGTTTTGTCTTTGTTTTCTATAGGCAAGCCATAGCCACAGTCTTCTTGTTCCCTATTGCTTTGTATTTTGAATGGAAAACTGCCCCACCCCTCTCATTCCTCACCTTCTGCAAGATCTTTATCCTTTCTTTAATTGGGATGACCATGTGTCTAAATCTTAATGGGGTTGCTCTTATCTATACATCGGCAACCTTAGCTGCAGCAACTACAAATTGCATCCCTGTCATTACCTTCCTTTTTGCCCTTCTATTCAGGGTGGAGGCATTGAGGTTAAAGTCAATAACAGGAATAGCAAAGGTTGGAGGAATAAATCTTTGTATGGGTGGTGTAGTGATTTTGGCATTCTACAAAGGCCCTCAACTCACAGTTTTTAATAATCATCATCTTATTGCTACTCACAATCATCATCATCAACATCAACTTCATGTTGCCTCAGCCAACACTTGGGTAAAGGGTACCTTCCTAATGTTGACTTCAAATATCTTATGGGGTTTATCACTTGTACTTCAGGCATTTGTATTCGAAAGTTATCCTTCAACACTTCTATTCACTAGTTTGCAATGTCTCGTAAGCTCATTTCAATCCTTCATTATTGCCATTGCATTGGAGAGAAACCTTGACGAATGGAAATTGGGCTGGAATGTTAGACTTCTTGCAGTAGCATATTGCGGAATAGTGGCGACTGGAATTACTTATTCTCTTCAAACATGGATTATTAAGAAGAAAGGACCAGTTTTTCTAGCCATGTCAACACCAATTATTCTTGTCATCACAACTCTTTCTTCGGCTATTTTTCTTGGCGAGAGTATCACCCTTGGAAGTGGTTTAGGAGGCCTATTATTGATCGGAGGTCTCTACAGTGTGTTGTGGGCAAAGAGAAAAGAGCAAAAAGTCAATGAAGAGCTCAACAAAGTTGACAAAGAATGCAGTTTGCCAGAGAAGGAAAATAGGGTTCTTCCTTGA 1062 39.83 MEEKKAYAAVLLRHGIYAVMFLLSKAAFDGGMNSFVFVFYRQAIATVFLFPIALYFEWKTAPPLSFLTFCKIFILSLIGMTMCLNLNGVALIYTSATLAAATTNCIPVITFLFALLFRVEALRLKSITGIAKVGGINLCMGGVVILAFYKGPQLTVFNNHHLIATHNHHHQHQLHVASANTWVKGTFLMLTSNILWGLSLVLQAFVFESYPSTLLFTSLQCLVSSFQSFIIAIALERNLDEWKLGWNVRLLAVAYCGIVATGITYSLQTWIIKKKGPVFLAMSTPIILVITTLSSAIFLGESITLGSGLGGLLLIGGLYSVLWAKRKEQKVNEELNKVDKECSLPEKENRVLP 353
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 16951654 16980087 + Tan0008538.1 Tan07g0900 758431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan07g0900 353 SUPERFAMILY Multidrug resistance efflux transporter EmrE 40 150 - -
Tan07g0900 353 Pfam EamA-like transporter family 10 131 IPR000620 GO:0016020(InterPro)
Tan07g0900 353 Pfam EamA-like transporter family 184 322 IPR000620 GO:0016020(InterPro)
Tan07g0900 353 PANTHER WAT1-RELATED PROTEIN 13 336 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
Tan07g0900 353 SUPERFAMILY Multidrug resistance efflux transporter EmrE 242 328 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan07g0900 Tan-Chr7:16951654 Tan07g0904 Tan-Chr7:17146161 5.70E-133 dispersed
Tan07g0896 Tan-Chr7:16671996 Tan07g0900 Tan-Chr7:16951654 2.50E-20 proximal
Tan07g0900 Tan-Chr7:16951654 Tan07g0901 Tan-Chr7:16952750 2.30E-150 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan07g0900 - - - 0.0