Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan07g0906 ATGGCGAAATCACCAGAAAATGAACATCCACACAAGGCTTTTGGTTGGGCTGCTCGAGATTCTTCTGGCTTACTCTCCCCTTTTCAGTTCTCTCGAAGGGAAGATGGTGAGGATGATGTCAGTATCAAAGTCCTTTACTGTGGGGTTTGCCATTCTGATCTGCATATGCTCAAGAATGATTGGGGTGCCACAGATTATCCTATAGTCCCAGGGCATGAGATTGTTGGAGTTGTGACTTCTGTTGGGAAAAATGTGAAGAAATTCAAGGCAGGGGACGAAGTCGGGGTCGGTGTCATAGTTGGATCTTGTAGAAGTTGTGAAAATTGTAAACAAGACTTGGAGAGTTACTGCCCCAAGATGATATATACTTACAATTCTCCTGCAATTGATGGATCGAAGAATTACGGCGGTTATTCCGATAAGATCGTCGTCGATCAACATTTTGTCGTAAAATTTCCTAAAAGCTTAGCTCTTGATGCTGGGGCTCCCCTTCTATGTGCTGGAATTACAGTTTATAGCCCAATGAAATATTTTGGAATGACTGAACCTGGTAAGCATTTGGGTGTGGCTGGACTTGGTGGCCTTGGTCATGTTGCTGTTAAGTTTGGTAAGGCATTTGGCTTGAAAGTTACTGTCATTAGTACCTCTCCCAAGAAGAAGGACGAAGCAATCAATGGGCTCGGTGCTGATGCTTTTGTTGTTTCGAGTGATCCCGCAGAAATGAAGGCTGCAATGGGAACCATGGATTACATTATGGACACAATATCCGCTGTTCATGCTCTTGATCCATTGATTAGTCTGCTAAAGCTCAATGGAAAATTGGTCGCTGTGGGTTTACCTAACAAACCAGTGGACCTATCGCTCGGGTTTCTCGCTTCTGGTAGGAAGCAGGTTGCTGGAAGCAACTTTGGAGGACTGAAAGAGACACAGGAGATGTTGGATTTCTGTGGAAAACACAATATTACAGCAGATATTGAGCTCATTAAGATGGATGGCATTAACTCAGCTATCAAAAGGCTCGCGAAAGCTGATGTTAAGTATCGATTCGTGATCGACATCGAAAACTCTTTCAAATAA 1077 43.55 MAKSPENEHPHKAFGWAARDSSGLLSPFQFSRREDGEDDVSIKVLYCGVCHSDLHMLKNDWGATDYPIVPGHEIVGVVTSVGKNVKKFKAGDEVGVGVIVGSCRSCENCKQDLESYCPKMIYTYNSPAIDGSKNYGGYSDKIVVDQHFVVKFPKSLALDAGAPLLCAGITVYSPMKYFGMTEPGKHLGVAGLGGLGHVAVKFGKAFGLKVTVISTSPKKKDEAINGLGADAFVVSSDPAEMKAAMGTMDYIMDTISAVHALDPLISLLKLNGKLVAVGLPNKPVDLSLGFLASGRKQVAGSNFGGLKETQEMLDFCGKHNITADIELIKMDGINSAIKRLAKADVKYRFVIDIENSFK 358
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 17629239 17639485 + Tan0014669.1 Tan07g0906 758437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan07g0906 358 FunFam Cinnamyl alcohol dehydrogenase 167 323 - -
Tan07g0906 358 SMART PKS_ER_names_mod 23 351 IPR020843 GO:0016491(InterPro)
Tan07g0906 358 Gene3D - 167 323 - -
Tan07g0906 358 Pfam Zinc-binding dehydrogenase 194 316 IPR013149 -
Tan07g0906 358 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 71 85 IPR002328 GO:0008270(InterPro)|GO:0016491(InterPro)
Tan07g0906 358 SUPERFAMILY GroES-like 20 185 IPR011032 -
Tan07g0906 358 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 158 321 IPR036291 -
Tan07g0906 358 CDD CAD1 14 352 IPR047109 GO:0016616(InterPro)
Tan07g0906 358 Gene3D - 16 353 - -
Tan07g0906 358 PANTHER ALDEHYDE REDUCTASE 5 356 IPR047109 GO:0009809(PANTHER)|GO:0016616(PANTHER)|GO:0016616(InterPro)|GO:0045551(PANTHER)
Tan07g0906 358 FunFam probable cinnamyl alcohol dehydrogenase 16 175 - -
Tan07g0906 358 Pfam Alcohol dehydrogenase GroES-like domain 36 154 IPR013154 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan07g0906 Tan-Chr7:17629239 Tan07g0908 Tan-Chr7:17673509 1.70E-177 dispersed
Tan07g1281 Tan-Chr7:58331162 Tan07g0906 Tan-Chr7:17629239 2.90E-06 dispersed
Tan07g1282 Tan-Chr7:58331162 Tan07g0906 Tan-Chr7:17629239 1.90E-06 dispersed
Tan07g0906 Tan-Chr7:17629239 Tan07g0907 Tan-Chr7:17673509 1.70E-177 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan07g0906 K00083 - csv:101205228 638.647