Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tan07g0941 | ATGGAGATGGGTTTGGTTAGATCATCAAAAGACAACAGCTGGTGGGTTTTTACACTTCCTTACCTTGTTGGTTGGGAGAACTCTAGTGTTGTTGATTGTTGTGTCATTCTTCTCCTTTGTTTTCTTTCTGTCGGTCTTCTCACTTGGGCTTTTGCCGTCGGTGGTACTGCTTGGAAAAATGGAAGGAATGAAAGAGGTCGAGTCCCCATTCCGGGTCCGAGTGGCCTTCCAATTCTTGGCAGTTTGTTCACTCTTACCCGTGGCTTACCCCACCGTACTCTTGCGGCCATGGCAGCTGCCCGAGGAAACTCCCAGCTGATGGCCTTCAGTCTCGGCTCCACTCCTTTAGTGGTTTCTTCCGACCCCAACACCGCAAAGGAAATCCTGACCTCACCTCACTTCGCTGACCGCCCACTGAAGCAGTCTGCAAAAAACATGATGTTCAGTCGAGCCATAGGGTTCGCACCAAACGGAACCTACTGGCGTCTCCTCAGAAGAATCGCCTCTTCACATCTCTTCTCTCCCAGGCGTATTGCCGCTCACGAAGCCGCTCGTCAGCTCGAATGCACCGCTATGTTACAAAGCATTCACAACGACCAAACCCTCCACGGAACTGTCTCTCTCAGGAAGCACCTTCAAGCAGCCGCCTTGAACAACGTCATGTGGACCGTCTTCGGCAAGCGCTTCGACCCAACCGATTCCAAATTCGAAGCGCTTCGGGATTTGGTTCGAGAAGGGTTCGACCTCTTGGGTGCCTTCAACTGGTCCGATTACCTCCCATGGCTTTCTTGCTTCTACGACCCTTGTCGTATTAACCAACGCTGCGCCAAACTTGTCCCTAAAGTTACCAATTTCGTCCAAGCTGTTATTAATGAGCACCGTCGCTCTAAAACCCTGTCGGATGATTCCGATTTTGTTCACGTTTTGCTCTCTCTCGATGGCCACGAAAAGCTTAACGATGATGACATGGTCGCTGTTTTATGGGAAATGATTTTCAGAGGGACGGATACGACGGCGCTGCTAACAGAGTGGGTGATGGCGGAGTTAGTTTTGCACAGTGATGTACAGGAAGAAGTTGGGAGGGAAATCCAGAGGGCTGTGGGCGGTGACGGAAGAACACTCACAGACGCTGACGTGGCCAAACTCCCTTACTTACAGGCGGTGGTGAAGGAGACTCTGCGGCTGCACCCACCGGGCCCACTTCTCTCGTGGGCCCGTCTTTCTTCGTCCGACGTCCAGCTCAGCAACGGCATGCTTATCCCTGAGAACACAACCGCCATGGTCAATATGTGGGCCATCACCCACGACCCGCACGTATGGGAGGCTCCACACGTGTTCAACCCGGGGAGGTTCATGGCCGCCGACGTGGACGTCAGGGGCAGTGACCTACGCCTGGCGCCCTTTGGGGCTGGGCGGAGGGTCTGCCCGGGAAAAAACCTCGGCCTTGTCACTGTCACGCTTTGGGTGGCTAAGCTGGTCCATCACTTTAAATGGGCCCCCGACCCGGCCCACCCTGTGGACCTCACCGAACTCCTCAAGCTCTCTTGTGAGATGAAGAATCCTCTACGTGCTGTCGCAGTGAAAACACGTGCACTTTAG | 1599 | 53.85 | MEMGLVRSSKDNSWWVFTLPYLVGWENSSVVDCCVILLLCFLSVGLLTWAFAVGGTAWKNGRNERGRVPIPGPSGLPILGSLFTLTRGLPHRTLAAMAAARGNSQLMAFSLGSTPLVVSSDPNTAKEILTSPHFADRPLKQSAKNMMFSRAIGFAPNGTYWRLLRRIASSHLFSPRRIAAHEAARQLECTAMLQSIHNDQTLHGTVSLRKHLQAAALNNVMWTVFGKRFDPTDSKFEALRDLVREGFDLLGAFNWSDYLPWLSCFYDPCRINQRCAKLVPKVTNFVQAVINEHRRSKTLSDDSDFVHVLLSLDGHEKLNDDDMVAVLWEMIFRGTDTTALLTEWVMAELVLHSDVQEEVGREIQRAVGGDGRTLTDADVAKLPYLQAVVKETLRLHPPGPLLSWARLSSSDVQLSNGMLIPENTTAMVNMWAITHDPHVWEAPHVFNPGRFMAADVDVRGSDLRLAPFGAGRRVCPGKNLGLVTVTLWVAKLVHHFKWAPDPAHPVDLTELLKLSCEMKNPLRAVAVKTRAL | 532 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 7 | 19799019 | 19800833 | - | Tan0000120.1 | Tan07g0941 | 758472 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tan07g0941 | 532 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 468 | 477 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Tan07g0941 | 532 | PRINTS | E-class P450 group I signature | 342 | 368 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan07g0941 | 532 | PRINTS | E-class P450 group I signature | 475 | 498 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan07g0941 | 532 | PRINTS | E-class P450 group I signature | 429 | 453 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan07g0941 | 532 | PRINTS | E-class P450 group I signature | 465 | 475 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan07g0941 | 532 | PRINTS | E-class P450 group I signature | 100 | 119 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan07g0941 | 532 | PRINTS | E-class P450 group I signature | 322 | 339 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan07g0941 | 532 | PRINTS | E-class P450 group I signature | 215 | 233 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan07g0941 | 532 | PRINTS | E-class P450 group I signature | 386 | 404 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan07g0941 | 532 | Gene3D | Cytochrome P450 | 57 | 530 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan07g0941 | 532 | PANTHER | CYTOCHROME P450 78A7-RELATED | 6 | 525 | IPR051996 | - | |
| Tan07g0941 | 532 | Pfam | Cytochrome P450 | 71 | 506 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan07g0941 | 532 | FunFam | Cytochrome P450 78A5 | 62 | 530 | - | - | |
| Tan07g0941 | 532 | SUPERFAMILY | Cytochrome P450 | 70 | 527 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan07g0941 | 532 | CDD | CYP78 | 102 | 522 | - | - | |
| Tan07g0941 | 532 | PRINTS | P450 superfamily signature | 333 | 350 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan07g0941 | 532 | PRINTS | P450 superfamily signature | 475 | 486 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan07g0941 | 532 | PRINTS | P450 superfamily signature | 387 | 398 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan07g0941 | 532 | PRINTS | P450 superfamily signature | 466 | 475 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Tan06g1869 | Tan-Chr6:48239787 | Tan07g0941 | Tan-Chr7:19799019 | 2.40E-130 | dispersed | |
| Tan07g0941 | Tan-Chr7:19799019 | Tan03g1940 | Tan-Chr3:74535539 | 3.30E-68 | dispersed | |
| Tan07g0941 | Tan-Chr7:19799019 | Tan08g1279 | Tan-Chr8:42694608 | 2.90E-72 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tan07g0941 | K20619 | - | csv:101214099 | 848.966 |