Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan07g0951 ATGGGTTCTAAATCCCAAGTGTTATTGAACCCACAAGGTTTGTTTGAAGATCAAGATCATCAACAAGCATCAGTAGAATCAGCTCATTCTTCTCAAATGGGATTCTTCTCTTTCCCTTCAAACTTAACTTTTTTTCAACTCCCTTCAATTGATCCTCAACAACAAACCCATTCTCCTTCTCCTCCATTTGAGACTCCTAATTTCTCCACTTCCAATAATACCCTCTCTGAAACCCTACTTTCTTCTTCTTTTTTGCCCCTCAAACACTCCCCCTCCTCTGATTTTGCACCTCAACACCTCCTTTCCTTGCAAACTTCCACTCCAAATCTATGGCCATGGGGAGAGGTTGGAGAGAAGTTGATGAGTGGGAAGAGAAATGAGTATCAATTGGGAGTATCAACAATGAAGATGAAGAAGATGAAAGGAAGAAGAAAGGTGAGAGAGCCAAGATTCTCTTTCAAGACCATGAGCGATGTTGATGTTCTTGATGATGGTTACAAATGGCGAAAGTACGGACAGAAAGTGGTCAAAAACACACAGCATCCTAGAAGCTATTATCGTTGTACACAAGATCATTGTAGGGTAAAGAAACGAGTAGAGAGATTAGCTGAGGATCCAAGAATGGTGATTACAACTTATGAAGGAAGACACATTCATTCTCCTTCTCATGATTCTGAAGACTCTGAAGCTCAAACCCATCTCAACAATTTCTTTTGGTAA 720 40.28 MGSKSQVLLNPQGLFEDQDHQQASVESAHSSQMGFFSFPSNLTFFQLPSIDPQQQTHSPSPPFETPNFSTSNNTLSETLLSSSFLPLKHSPSSDFAPQHLLSLQTSTPNLWPWGEVGEKLMSGKRNEYQLGVSTMKMKKMKGRRKVREPRFSFKTMSDVDVLDDGYKWRKYGQKVVKNTQHPRSYYRCTQDHCRVKKRVERLAEDPRMVITTYEGRHIHSPSHDSEDSEAQTHLNNFFW 239
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 21089362 21091505 - Tan0016148.1 Tan07g0951 758482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan07g0951 239 Gene3D WRKY domain 149 215 IPR036576 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Tan07g0951 239 Pfam WRKY DNA -binding domain 163 219 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Tan07g0951 239 MobiDBLite consensus disorder prediction 51 72 - -
Tan07g0951 239 FunFam WRKY transcription factor 57 148 222 - -
Tan07g0951 239 SUPERFAMILY WRKY DNA-binding domain 154 221 IPR036576 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Tan07g0951 239 ProSiteProfiles WRKY domain profile. 157 222 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Tan07g0951 239 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 105 225 IPR044810 GO:0003700(InterPro)
Tan07g0951 239 SMART WRKY_cls 162 221 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan06g0714 Tan-Chr6:5453674 Tan07g0951 Tan-Chr7:21089362 8.00E-27 dispersed
Tan07g0951 Tan-Chr7:21089362 Tan10g0014 Tan-Chr10:432088 8.80E-37 dispersed
Tan03g1377 Tan-Chr3:70290920 Tan07g0951 Tan-Chr7:21089362 4.20E-48 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
27926 PF03106 WRKY 3.50E-24 CL0274 Tan TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan07g0951 - - - 0.0