Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan07g0985 ATGGCTTCATCAAGTCCCATCTCCCTCCTCACACTCTTCACTCTCCTCATCCTATTCTCCTCTTTCTCCTCCGCCGTCCCTGGCCCCGTCCGGACGGCGGAGATTTGCCAATCGACAACTTCTCCACCGTTCTGCAAATCCTTCCTCCCCAACTCTCTAGCCACCGTCCACTCCCATTGCCGCTTCACTCTCCACCACGCTCTCGCCCATGCACGCGCCTTCCTCGCCCTCATCGACGTGCAGCTCACCCTCTTTCCCTCCCTCTCCGCCCTCCACGACTGCCGGTCCCTCGCCGCGGCAAACCTTGATTTCATATCCAACACCTTCCAAATAGTGAACACCACCACCAATACCCTTCCCTTTTACCAAGCCGATGAGATGGTGTCATTGCTTAGCGCAGTGATCACCAATGAAGAGACTTGTTACGAGGGGCTGGTGGGCTCGGGTTTGGGCTTGGGCTTGGTTGATAAGGTGTCGAATTCGATCTCGTTTGATAGAAAGCTTTACAGTTTGTACCTTTCTTTGTTCAAATTGGGTTGGGTTTCTGAGGGAGTGAAAGCTCCCGAGTTACCAAATATGAAGCATTTTGGGCTGGGAAATGGGGCGTTGAAGCTCAAGATGTCGCCCAAAGACCGCGCCTATTATGAGCGGTTGGTGCATCGGAAGAAGCCGGCCGGTAGAAGGCTTCTTCAGACCAATACTAGTGAAGATGATGGAATTTTGGTCAACGGTATTGTTGGGGTGGATCAAAATGGAACATACGACTTCACCACCATCAACGCCGCCATTGCGGCGGCTCCGAACAACACTGCCGCCGCCAACGGATACTTCTTGATCTTCGTCACCGCCGGCATTTACAACGAGAGTGTGTTGGTTCCGAAAAACAAAAGGTACGTGTTGATGATCGGAGAAGGTAACAACCAAACCATCATCACTGCCAACAAAAACGTCGTCGACGGCTCTACCACATTCAATAGCGGAACCGTTATTGTGGAGGGAACAGGGTTCTTCGGAGTGAACCTAACGATCACCAACACAGCCGGTGCCAACAAACACCAAGCCGTGGCATTGCGAGTGAGCGCCGACACGACGACGTTTTACACTTGCATATTTGAAGGGTACCAAGACACTCTATACACCCACTCCCTCCGCCAATTCTACCGAGAGTGCGACATCTACGGAACTATCGACTTCATCTTCGGCAATGCCGCCGTCGTCTTACAGAACTGCAACCTCTACGCCCGCCTCCCATTGAGCGGCCAGTTCAACGCCCTCACCGCGCAGGGCCGAACCGACCCGAATCAGAACACTGGCACCTCCATCCACAATTGCACCATCAAGCCCACTGCCGAGCTCGCAGCCAGCCCCAACACCAAGACCTACTTGGGGCGGCCCTGGAAGGAATATTCTCGAACAGTTTACATGCAGTCCTTTATCGATGCCTTTATCGACCCTGCCGGATGGAAGGAGTGGGATGGGACTTTGAATTTGAACACCTCGTATTACGCAGAGTTTAATAACTCCGGGCCGGGTTCCGACACTTCGAGACGGGTTCAATGGGCGGTCGGTGTGATCAACGCGACTGTGGCTAATAACTTCACCGTGTCGACCTTCTTGGGCGCAGATCAATGGCTGCCGCGGACCACCGTGCCGTACACTGCTGGTTTGATACAATAA 1677 53.49 MASSSPISLLTLFTLLILFSSFSSAVPGPVRTAEICQSTTSPPFCKSFLPNSLATVHSHCRFTLHHALAHARAFLALIDVQLTLFPSLSALHDCRSLAAANLDFISNTFQIVNTTTNTLPFYQADEMVSLLSAVITNEETCYEGLVGSGLGLGLVDKVSNSISFDRKLYSLYLSLFKLGWVSEGVKAPELPNMKHFGLGNGALKLKMSPKDRAYYERLVHRKKPAGRRLLQTNTSEDDGILVNGIVGVDQNGTYDFTTINAAIAAAPNNTAAANGYFLIFVTAGIYNESVLVPKNKRYVLMIGEGNNQTIITANKNVVDGSTTFNSGTVIVEGTGFFGVNLTITNTAGANKHQAVALRVSADTTTFYTCIFEGYQDTLYTHSLRQFYRECDIYGTIDFIFGNAAVVLQNCNLYARLPLSGQFNALTAQGRTDPNQNTGTSIHNCTIKPTAELAASPNTKTYLGRPWKEYSRTVYMQSFIDAFIDPAGWKEWDGTLNLNTSYYAEFNNSGPGSDTSRRVQWAVGVINATVANNFTVSTFLGADQWLPRTTVPYTAGLIQ 558
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 23190646 23193760 + Tan0015617.1 Tan07g0985 758516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan07g0985 558 SMART PMEI_2 27 175 IPR006501 GO:0004857(InterPro)
Tan07g0985 558 Pfam Pectinesterase 248 541 IPR000070 GO:0030599(InterPro)|GO:0042545(InterPro)
Tan07g0985 558 Gene3D Invertase/pectin methylesterase inhibitor family protein 33 178 IPR035513 -
Tan07g0985 558 Pfam Plant invertase/pectin methylesterase inhibitor 34 173 IPR006501 GO:0004857(InterPro)
Tan07g0985 558 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 34 178 IPR035513 -
Tan07g0985 558 Gene3D - 243 556 IPR012334 -
Tan07g0985 558 PANTHER PECTINESTERASE 12 547 - GO:0030599(PANTHER)|GO:0046910(PANTHER)
Tan07g0985 558 SUPERFAMILY Pectin lyase-like 242 555 IPR011050 -
Tan07g0985 558 CDD PMEI-like_3 35 177 - -
Tan07g0985 558 ProSitePatterns Pectinesterase signature 2. 392 401 IPR033131 -
Tan07g0985 558 FunFam Pectinesterase 241 556 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g3845 Tan-Chr1:103212726 Tan07g0985 Tan-Chr7:23190646 2.50E-132 dispersed
Tan04g0744 Tan-Chr4:6425214 Tan07g0985 Tan-Chr7:23190646 8.30E-118 dispersed
Tan07g0985 Tan-Chr7:23190646 Tan10g0389 Tan-Chr10:3069015 3.60E-89 dispersed
Tan07g0985 Tan-Chr7:23190646 Tan06g0778 Tan-Chr6:6097598 7.60E-164 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan07g0985 K01051 - csv:101216984 847.425