Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan07g1092 ATGGGAATTATAGCGACGGCGTCGAGTTCTTGTATGCCACCATTTTTGTTCAACTCAAAGAGTGATTGTAATTCTATGTCACAACAAGACTACCACCACACGGCGGCAGGCTTCTTCACGCCCTTCTCCAATGGCTTCGACAGATCCTCCGCCGCCGCCACCCACCAAGACCCTCAACATCAACACTACCACCACATAGCCCACCAGATCCGCAAGGAGAAGCTCCGTCTCCAAGGCTTCGACCCACCACCACCTCCACCGTCTTTGGTCGGAATTGACGACGACGATGACGACCAATCCGCCGGCCCCGCCGCCCTCCACCACGTCTACGACTCCACCGGAATTTTATCGGAAATGTTCAATTTTCCTCCGCCTCCACCTCCACCGCCGCAGACAGATTGGTACGGTAACCGGCAAGCGATGAATGCGGCCGACTCGGCGGTGGCCATGCAGCTTTTTCTGATGAACCCAAACCCCCGGTCGCCGTCTCCTCCGCCGCCAGCACCGGCGCCGGTGTCCTCAACTCTCCACATGCTTCTTCCAAATCCATCTTCAGGAGGGTCTTTTGGACAATTCACATGGGGGGTGGTTCCGGAGCAAGAAACAGGAGACCATTCATCTTCAAACCCTAACGAAGGCCGACTTTCGTTGTCATTATCATCGTCCTTAGAAGCTGCAAAAGCCGAGGAATTGAGAATGGGTGACAGCGGGTTACTTTATCAAAACCACCCTCACCCTCAACATGTCCATGTCGGAATTGGGTCTTCTAATTCTTCCTTGGGAGTTGTCAACTTGTTAAGAAACTCAAAGTATGTCAAAGCTGCACAAGAATTATTGGAGGAGTTTTGTAGCGTTGGAAGAGGTCAATTTAAGAAAAATAATAATAGTAACAACAAATTGAATAAATCAAATTTTCCCTCTCACGGCGGCGACGGCGGCGGCGGAGTCTCTTCCTCGACGTCAAAGGATCAGCCTCAGCCACAGCCACAGCCAGCCTTGTCAGCAGCTGATAGGATTGAACATCAGAGGAGGAAGGTCAAACTGTTATCTATGCTTGATGAGGTGGATCGAAGATACAACCATTACTGCGAGCAGATGCAAATGGTGGTGAATTCATTCGACGTAGTGATGGGGTTCGGGGCGGCGGTGCCATACACGGCGTTGGCGCAGAAGGCAATGTCGAGGCATTTCCGGTGTCTGAAAGACGCCATATCAGCGCAGCTGAAGCACAGCTGCGAGATGTTGGGGGAGAAAGATGGGGGAGTAACTGGAAGAGGCTCAGGAATAACTAAGGGAGAGACTCCAAGGCTTAAGCTGTTGGAGCAAAGCTTGAGGCAGCAACGAGCCTTCCACCAAATGGGCATGATGGAACAAGAAGCTTGGCGTCCCCAACGCGGCTTGCCCGAACGCTCTGTCAACATCTTGCGAGCTTGGCTCTTCGAGCATTTCCTTCATCCGTACCCTAGTGATGCTGATAAGCATTTGTTGGCTAGGCAGACTGGTTTATCAAGAAATCAGGTATCAAACTGGTTCATTAATGCCAGGGTTCGGTTGTGGAAACCCATGGTGGAAGAGATGTACCAACAAGAATCCAAAGAAGATGATGATGATGATAACACAGACGAGGACAGAGAAATCAACCCCCAACAAATTACCTCTAATCCTCTTTCACAAACTCCAACGCCGCCTACTTCCTCCGCCGCACCTCCACCGTCCTCCGCCGCTCCACCACCCAAAAAACCCGATCACCCCACCCAAAACACGCAAAACCAACCAAATCCAAAGCATCACCCATATTCCTCCTCCTCCCCCGTAACCCAGGCGCCGCCGCTTCCTCCTCCTCCGACGGTGCCGCACTGCTTTCCGGCCACCCACTATGACTCAGACCTGCAGGACACGTGTCGGCGTGTCAGCGTTCTCACTGCACCTGATCATCAATTCGGGACCACAAGCAGCTCTGCCACGTCTGACATCCCGGGGCCCACCACACTCATAAGGTTCGGGACCACCACCGGTGACGTGTCGCTCACACTAGGTTTACGCCACGCCGGAAATATTCCCGACAACAACCCTTCTTTCTCCCTCAGATCCGAGTTTGGAGGCTGTTAA 2109 52.63 MGIIATASSSCMPPFLFNSKSDCNSMSQQDYHHTAAGFFTPFSNGFDRSSAAATHQDPQHQHYHHIAHQIRKEKLRLQGFDPPPPPPSLVGIDDDDDDQSAGPAALHHVYDSTGILSEMFNFPPPPPPPPQTDWYGNRQAMNAADSAVAMQLFLMNPNPRSPSPPPPAPAPVSSTLHMLLPNPSSGGSFGQFTWGVVPEQETGDHSSSNPNEGRLSLSLSSSLEAAKAEELRMGDSGLLYQNHPHPQHVHVGIGSSNSSLGVVNLLRNSKYVKAAQELLEEFCSVGRGQFKKNNNSNNKLNKSNFPSHGGDGGGGVSSSTSKDQPQPQPQPALSAADRIEHQRRKVKLLSMLDEVDRRYNHYCEQMQMVVNSFDVVMGFGAAVPYTALAQKAMSRHFRCLKDAISAQLKHSCEMLGEKDGGVTGRGSGITKGETPRLKLLEQSLRQQRAFHQMGMMEQEAWRPQRGLPERSVNILRAWLFEHFLHPYPSDADKHLLARQTGLSRNQVSNWFINARVRLWKPMVEEMYQQESKEDDDDDNTDEDREINPQQITSNPLSQTPTPPTSSAAPPPSSAAPPPKKPDHPTQNTQNQPNPKHHPYSSSSPVTQAPPLPPPPTVPHCFPATHYDSDLQDTCRRVSVLTAPDHQFGTTSSSATSDIPGPTTLIRFGTTTGDVSLTLGLRHAGNIPDNNPSFSLRSEFGGC 702
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 32115491 32121833 + Tan0021969.2 Tan07g1092 758623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan07g1092 702 MobiDBLite consensus disorder prediction 562 583 - -
Tan07g1092 702 MobiDBLite consensus disorder prediction 290 339 - -
Tan07g1092 702 MobiDBLite consensus disorder prediction 528 624 - -
Tan07g1092 702 MobiDBLite consensus disorder prediction 584 604 - -
Tan07g1092 702 SMART HOX_1 461 525 IPR001356 GO:0003677(InterPro)
Tan07g1092 702 MobiDBLite consensus disorder prediction 605 620 - -
Tan07g1092 702 FunFam BEL1-like homeodomain protein 4 464 526 - -
Tan07g1092 702 MobiDBLite consensus disorder prediction 290 305 - -
Tan07g1092 702 SUPERFAMILY Homeodomain-like 462 528 IPR009057 -
Tan07g1092 702 SMART prehox3 260 406 IPR006563 -
Tan07g1092 702 Pfam Homeobox KN domain 478 517 IPR008422 GO:0003677(InterPro)|GO:0006355(InterPro)
Tan07g1092 702 Gene3D - 464 526 - -
Tan07g1092 702 MobiDBLite consensus disorder prediction 546 561 - -
Tan07g1092 702 ProSiteProfiles 'Homeobox' domain profile. 458 521 IPR001356 GO:0003677(InterPro)
Tan07g1092 702 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 209 558 IPR050224 GO:0000978(PANTHER)|GO:0000981(PANTHER)|GO:0006357(PANTHER)
Tan07g1092 702 MobiDBLite consensus disorder prediction 529 543 - -
Tan07g1092 702 MobiDBLite consensus disorder prediction 313 331 - -
Tan07g1092 702 CDD homeodomain 461 522 IPR001356 GO:0003677(InterPro)
Tan07g1092 702 Pfam Associated with HOX 266 405 IPR006563 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan07g1092 Tan-Chr7:32115491 Tan07g1612 Tan-Chr7:67497117 4.50E-81 dispersed
Tan07g1091 Tan-Chr7:32115087 Tan07g1092 Tan-Chr7:32115491 0.00E+00 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
27944 PF07526 POX 1.00E-52 No_clan Tan TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan07g1092 - - - 0.0