Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan07g1094 ATGTCCTCCGCCTCGATGTACAAAGATGACGTTTACGATCGCATTTGGATGCCCATGTCTCTCCTTCCGGAATGGACTTCAATAACCACTTCGCACACAATAGATGTCAGTGATTCGCTGTTCTTCTTACCGGCTCCGGCGGTCATGAACTCGGCGGCCACCCCAACAGACGGTTCTGCTCCATTAGAATTCCACTGGATTTCACCAACCAACACCGCTGAGTTTTTCATCTACATGTACTTTTCAGAGTTTCAGAAGCTTCAATCCAATGAGTCCAGATTGTTCAACATAATGCTCAATGGGAAAAGTTGGTATAGTAAATCGGTTTCTCCACCTTACTTAGGAGAATTTGTCGTTTACAGTACCAAACCATTGACCGGCGGAATATTCAATTTCTCCATTGTCAAAACCCCCAATTCTACTCTTCCTCCAGTCCTCAATGCCATTGAGGCTTATAGCCTCATAAATTTCCTTCTATCTGACACAAACGAACAAGATGTGGAGAGCATTTCAAACATCAAGAAAGTTTATGGAGTTGAAAGAAACTGGCAAGGAGATCCCTGTGCCCCTACGGAATTTATATGGCAAGGACTCAACTGCAGCTTCGTGGACTCTGAGCCTCCTAGAATTACATCCTTGGATTTGTCCTCTAGTGGACTCACAGGGAAAATAGCTCATGACATAGCAAATCTTACCATGCTAGAAACTCTAGATTTATCCAACAATAACTTAAGTGGAACAGTGCCTGAGTTTCTTGCTCAATTACCATCATTGAAGATCTTAAATTTAGAAAGAAACAAACTTTCAGGACTTATTCCTTCCCAACTCATTGAAAAGTACAATGACGGTTCTTTATCCTTAAGCTTCGGTGAAAATCCAAACCTGTTCATCACAGCTCCAAGTGAAGAAAAGAAGCGCAACATACTTGTTCCTGTACTAGCATCAGTTGGTGGATTTGTTCTGCTTTTGTTCTTAATTTCAATTGTTATCTTTTGGATCAAGGCTAGACAAAGAAAACAACAAGCTGTTGTGATTGGAAGAACAAAACAGAATGTCGACCAATCTGAACAATTGGGTGCAACCAAAAAATGCTATTCTTACTCTGATATTTTGAGAATGACAAACAATTTTGAGCGACCTCTTGGAGAAGGTGGCTTTGGAAGAGTTTATTATGGCCAGATTGGCAGCACTGAAGTAGCTGTTAAGATGCTTTCCCCTCAATCAGTTCATGGGTTTCAACAATTTCAAGCTGAGGTCGACACTCTCATGAGGGTTCATCACAAAAATTTGACTGGTCTTGTTGGGTATTGTAATGAATCAAACAATAAAGGACTAATATATGAATACATGGGGAAAGGAAACTTGGGATCTCTTATTTCAGGTGGTCAATCGACAAAGGTTTTGAATTGGAAAGATAGGCTTCTTATAGCAGTTGATGCAGCACATGGATTGGAGTACCTTCATCATGGTATCAAACCTGCTATAATACATAGAGATGTAAAATCTACAAACATCTTATTGGACAACAATTTTCGAGCAAAAGTGTCTGATTTTGGGTTATCAAGAATTTTTTCTACGGAAAGTGGCGTCACTCATGTGACAACCACCAATGTAGTTGGTACTCATGGCTACATTGATCCAGAGTACCACACAACGTTCAGATTAAACGAGAAAAGTGACGTTTATGGATTTGGAGTGATTCTTCTCGAAATCATAACTGGAAAGCCAGCTTTGATAAGAACTAAAGACCAAGTAATTCATGTCTATCAATGGGTCAAAAGCTTGCTCTCTCAAGGTGATATTCAGTCGATCATTGACCCACAAATTGAAGAAGATTTTGATGTGAACTCTGTTTGGAAAGTCGTGGACATAGCTATGTGTTGTGTATCTGTAAAATCTATAGATAGGCCTGATATGAACCAAATTCTATTGGAGCTGAAGGAATGTTTGGCCATGGAATTAGCTTGTCATAATCACAGTCAACCTGAATTAGCTGTTGCAGATTCTACTGTTTTATTTGGCCCCTTGGCAAGGTAG 2037 40.01 MSSASMYKDDVYDRIWMPMSLLPEWTSITTSHTIDVSDSLFFLPAPAVMNSAATPTDGSAPLEFHWISPTNTAEFFIYMYFSEFQKLQSNESRLFNIMLNGKSWYSKSVSPPYLGEFVVYSTKPLTGGIFNFSIVKTPNSTLPPVLNAIEAYSLINFLLSDTNEQDVESISNIKKVYGVERNWQGDPCAPTEFIWQGLNCSFVDSEPPRITSLDLSSSGLTGKIAHDIANLTMLETLDLSNNNLSGTVPEFLAQLPSLKILNLERNKLSGLIPSQLIEKYNDGSLSLSFGENPNLFITAPSEEKKRNILVPVLASVGGFVLLLFLISIVIFWIKARQRKQQAVVIGRTKQNVDQSEQLGATKKCYSYSDILRMTNNFERPLGEGGFGRVYYGQIGSTEVAVKMLSPQSVHGFQQFQAEVDTLMRVHHKNLTGLVGYCNESNNKGLIYEYMGKGNLGSLISGGQSTKVLNWKDRLLIAVDAAHGLEYLHHGIKPAIIHRDVKSTNILLDNNFRAKVSDFGLSRIFSTESGVTHVTTTNVVGTHGYIDPEYHTTFRLNEKSDVYGFGVILLEIITGKPALIRTKDQVIHVYQWVKSLLSQGDIQSIIDPQIEEDFDVNSVWKVVDIAMCCVSVKSIDRPDMNQILLELKECLAMELACHNHSQPELAVADSTVLFGPLAR 678
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 32334378 32365932 + Tan0014701.2 Tan07g1094 758625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan07g1094 678 PANTHER OS07G0107800 PROTEIN-RELATED 6 654 - -
Tan07g1094 678 SUPERFAMILY L domain-like 195 277 - -
Tan07g1094 678 Pfam Malectin-like domain 5 153 IPR024788 -
Tan07g1094 678 Pfam Leucine rich repeat 208 268 IPR001611 GO:0005515(InterPro)
Tan07g1094 678 FunFam Leucine-rich repeat receptor-like kinase 165 297 - -
Tan07g1094 678 FunFam Leucine-rich repeat receptor-like protein kinase 350 449 - -
Tan07g1094 678 Gene3D Transferase(Phosphotransferase) domain 1 450 667 - -
Tan07g1094 678 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 450 659 - -
Tan07g1094 678 ProSitePatterns Serine/Threonine protein kinases active-site signature. 495 507 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan07g1094 678 Gene3D Ribonuclease Inhibitor 167 286 IPR032675 -
Tan07g1094 678 Gene3D Phosphorylase Kinase; domain 1 347 449 - -
Tan07g1094 678 ProSiteProfiles Protein kinase domain profile. 375 650 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan07g1094 678 ProSitePatterns Protein kinases ATP-binding region signature. 381 402 IPR017441 GO:0005524(InterPro)
Tan07g1094 678 PRINTS Leucine-rich repeat signature 234 247 - -
Tan07g1094 678 PRINTS Leucine-rich repeat signature 255 268 - -
Tan07g1094 678 Pfam Protein tyrosine and serine/threonine kinase 377 644 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan07g1094 678 SMART serkin_6 375 650 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan07g1094 678 SUPERFAMILY Protein kinase-like (PK-like) 357 646 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan07g1094 Tan-Chr7:32334378 Tan08g1927 Tan-Chr8:71517396 6.70E-82 dispersed
Tan07g1093 Tan-Chr7:32334378 Tan07g1094 Tan-Chr7:32334378 0.00E+00 tandem
Tan07g1094 Tan-Chr7:32334378 Tan07g1095 Tan-Chr7:32334378 3.30E-254 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67865 PF07714 PK_Tyr_Ser-Thr 1.90E-41 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan07g1094 - - - 0.0